Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHBP21912 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.17■□□□□ 0.5
SDHBP21912 AL023284.2-201ENST00000405850 579 ntBASIC18.17■□□□□ 0.5
SDHBP21912 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.17■□□□□ 0.5
SDHBP21912 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SDHBP21912 RN7SL606P-201ENST00000472779 293 ntBASIC18.17■□□□□ 0.5
SDHBP21912 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.17■□□□□ 0.5
SDHBP21912 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHBP21912 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.17■□□□□ 0.5
SDHBP21912 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHBP21912 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.16■□□□□ 0.5
SDHBP21912 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.16■□□□□ 0.5
SDHBP21912 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.16■□□□□ 0.5
SDHBP21912 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.16■□□□□ 0.5
SDHBP21912 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.16■□□□□ 0.5
SDHBP21912 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 DNAJB3-202ENST00000449667 1266 ntBASIC18.16■□□□□ 0.5
SDHBP21912 CYMP-203ENST00000474680 1263 ntBASIC18.16■□□□□ 0.5
SDHBP21912 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.16■□□□□ 0.5
SDHBP21912 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.16■□□□□ 0.5
SDHBP21912 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.16■□□□□ 0.5
SDHBP21912 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.16■□□□□ 0.5
SDHBP21912 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.16■□□□□ 0.5
SDHBP21912 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.16■□□□□ 0.5
SDHBP21912 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.16■□□□□ 0.5
SDHBP21912 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.16■□□□□ 0.5
SDHBP21912 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SDHBP21912 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SDHBP21912 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHBP21912 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.16■□□□□ 0.5
SDHBP21912 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SDHBP21912 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SDHBP21912 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.15■□□□□ 0.5
SDHBP21912 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.15■□□□□ 0.5
SDHBP21912 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 AL049796.1-201ENST00000565336 1766 ntBASIC18.15■□□□□ 0.5
SDHBP21912 AL020996.1-203ENST00000536896 2307 ntBASIC18.15■□□□□ 0.5
SDHBP21912 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
SDHBP21912 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.15■□□□□ 0.5
SDHBP21912 RBM17P3-201ENST00000417687 1192 ntBASIC18.15■□□□□ 0.5
SDHBP21912 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SDHBP21912 AL049840.3-201ENST00000602669 611 ntBASIC18.15■□□□□ 0.5
SDHBP21912 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.15■□□□□ 0.5
SDHBP21912 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.15■□□□□ 0.5
SDHBP21912 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.15■□□□□ 0.5
SDHBP21912 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
SDHBP21912 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SDHBP21912 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SDHBP21912 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.14■□□□□ 0.5
SDHBP21912 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
SDHBP21912 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SDHBP21912 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.14■□□□□ 0.49
SDHBP21912 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SDHBP21912 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SDHBP21912 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SDHBP21912 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SDHBP21912 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.14■□□□□ 0.49
SDHBP21912 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SDHBP21912 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SDHBP21912 AC004832.2-201ENST00000426397 482 ntBASIC18.14■□□□□ 0.49
SDHBP21912 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.14■□□□□ 0.49
SDHBP21912 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SDHBP21912 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.14■□□□□ 0.49
SDHBP21912 IGHV3-22-201ENST00000520721 359 ntBASIC18.14■□□□□ 0.49
SDHBP21912 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SDHBP21912 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SDHBP21912 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SDHBP21912 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SDHBP21912 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
SDHBP21912 AC112907.3-201ENST00000577781 2400 ntBASIC18.14■□□□□ 0.49
SDHBP21912 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.14■□□□□ 0.49
SDHBP21912 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SDHBP21912 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms