Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TSPY22P-201ENST00000427496 604 ntBASIC21.47■■□□□ 1.03
ERCC3P19447 CHCHD2P8-201ENST00000429873 447 ntBASIC21.47■■□□□ 1.03
ERCC3P19447 AC246785.2-201ENST00000432512 513 ntBASIC21.47■■□□□ 1.03
ERCC3P19447 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC3P19447 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.47■■□□□ 1.03
ERCC3P19447 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
ERCC3P19447 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.47■■□□□ 1.03
ERCC3P19447 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.47■■□□□ 1.03
ERCC3P19447 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.47■■□□□ 1.03
ERCC3P19447 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC3P19447 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC3P19447 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC3P19447 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC3P19447 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.47■■□□□ 1.03
ERCC3P19447 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ERCC3P19447 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC3P19447 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.47■■□□□ 1.03
ERCC3P19447 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC3P19447 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC3P19447 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC3P19447 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.46■■□□□ 1.03
ERCC3P19447 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC3P19447 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC3P19447 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.46■■□□□ 1.03
ERCC3P19447 KRT18P23-201ENST00000435622 1283 ntBASIC21.46■■□□□ 1.03
ERCC3P19447 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ERCC3P19447 UNC93B7-201ENST00000509439 705 ntBASIC21.46■■□□□ 1.03
ERCC3P19447 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.46■■□□□ 1.03
ERCC3P19447 RNF126P1-202ENST00000569893 925 ntBASIC21.46■■□□□ 1.03
ERCC3P19447 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.46■■□□□ 1.03
ERCC3P19447 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC3P19447 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC3P19447 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.46■■□□□ 1.03
ERCC3P19447 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC3P19447 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.46■■□□□ 1.03
ERCC3P19447 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.46■■□□□ 1.03
ERCC3P19447 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.46■■□□□ 1.03
ERCC3P19447 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ERCC3P19447 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ERCC3P19447 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
ERCC3P19447 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 AL845331.1-201ENST00000424978 1190 ntBASIC21.45■■□□□ 1.02
ERCC3P19447 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.45■■□□□ 1.02
ERCC3P19447 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.45■■□□□ 1.02
ERCC3P19447 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.45■■□□□ 1.02
ERCC3P19447 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.45■■□□□ 1.02
ERCC3P19447 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.45■■□□□ 1.02
ERCC3P19447 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.45■■□□□ 1.02
ERCC3P19447 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
ERCC3P19447 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.45■■□□□ 1.02
ERCC3P19447 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
ERCC3P19447 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ERCC3P19447 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC3P19447 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ERCC3P19447 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.44■■□□□ 1.02
ERCC3P19447 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.44■■□□□ 1.02
ERCC3P19447 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.44■■□□□ 1.02
ERCC3P19447 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.44■■□□□ 1.02
ERCC3P19447 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.44■■□□□ 1.02
ERCC3P19447 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.44■■□□□ 1.02
ERCC3P19447 AC111152.3-201ENST00000569699 673 ntBASIC21.44■■□□□ 1.02
ERCC3P19447 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.44■■□□□ 1.02
ERCC3P19447 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ERCC3P19447 KRT18P1-202ENST00000452408 1331 ntBASIC21.44■■□□□ 1.02
ERCC3P19447 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.44■■□□□ 1.02
ERCC3P19447 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.44■■□□□ 1.02
ERCC3P19447 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ERCC3P19447 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC3P19447 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.43■■□□□ 1.02
ERCC3P19447 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.43■■□□□ 1.02
ERCC3P19447 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.43■■□□□ 1.02
ERCC3P19447 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
ERCC3P19447 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC3P19447 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC3P19447 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ERCC3P19447 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC3P19447 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms