Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD58P19256 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD58P19256 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD58P19256 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD58P19256 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD58P19256 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CD58P19256 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.93■□□□□ 0.78
CD58P19256 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CD58P19256 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.93■□□□□ 0.78
CD58P19256 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.93■□□□□ 0.78
CD58P19256 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.93■□□□□ 0.78
CD58P19256 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.93■□□□□ 0.78
CD58P19256 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CD58P19256 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.93■□□□□ 0.78
CD58P19256 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CD58P19256 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.93■□□□□ 0.78
CD58P19256 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD58P19256 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CD58P19256 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 AC099343.3-201ENST00000605834 2503 ntBASIC19.92■□□□□ 0.78
CD58P19256 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.92■□□□□ 0.78
CD58P19256 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.92■□□□□ 0.78
CD58P19256 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 AL512604.3-201ENST00000569583 964 ntBASIC19.92■□□□□ 0.78
CD58P19256 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CD58P19256 WIZP1-201ENST00000531444 2299 ntBASIC19.92■□□□□ 0.78
CD58P19256 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CD58P19256 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.92■□□□□ 0.78
CD58P19256 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD58P19256 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CD58P19256 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 AC034236.2-201ENST00000606662 1610 ntBASIC19.91■□□□□ 0.78
CD58P19256 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
CD58P19256 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
CD58P19256 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.91■□□□□ 0.78
CD58P19256 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.91■□□□□ 0.78
CD58P19256 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.91■□□□□ 0.78
CD58P19256 AC141257.4-201ENST00000634557 245 ntBASIC19.91■□□□□ 0.78
CD58P19256 AC136944.6-201ENST00000634818 245 ntBASIC19.91■□□□□ 0.78
CD58P19256 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CD58P19256 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 AC104581.1-202ENST00000635932 2618 ntBASIC19.91■□□□□ 0.78
CD58P19256 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CD58P19256 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.91■□□□□ 0.78
CD58P19256 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms