Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN1P18031 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN1P18031 AC093525.10-201ENST00000625130 1569 ntBASIC19.66■□□□□ 0.74
PTPN1P18031 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN1P18031 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPN1P18031 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTPN1P18031 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPN1P18031 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN1P18031 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN1P18031 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPN1P18031 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.66■□□□□ 0.74
PTPN1P18031 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.66■□□□□ 0.74
PTPN1P18031 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.66■□□□□ 0.74
PTPN1P18031 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
PTPN1P18031 AC079602.3-201ENST00000623931 403 ntBASIC19.66■□□□□ 0.74
PTPN1P18031 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN1P18031 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN1P18031 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PTPN1P18031 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN1P18031 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PTPN1P18031 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTPN1P18031 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN1P18031 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PTPN1P18031 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PTPN1P18031 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN1P18031 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN1P18031 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTPN1P18031 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN1P18031 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN1P18031 HBZP1-201ENST00000354915 429 ntBASIC19.65■□□□□ 0.74
PTPN1P18031 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN1P18031 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PTPN1P18031 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN1P18031 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN1P18031 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPN1P18031 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PTPN1P18031 AC083849.1-201ENST00000615227 514 ntBASIC19.65■□□□□ 0.74
PTPN1P18031 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPN1P18031 AL121956.5-201ENST00000625261 221 ntBASIC19.65■□□□□ 0.74
PTPN1P18031 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPN1P18031 AC112777.1-201ENST00000540175 1423 ntBASIC19.65■□□□□ 0.74
PTPN1P18031 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN1P18031 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PTPN1P18031 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PTPN1P18031 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
PTPN1P18031 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PTPN1P18031 AL499627.1-201ENST00000569373 2188 ntBASIC19.64■□□□□ 0.74
PTPN1P18031 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTPN1P18031 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN1P18031 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN1P18031 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN1P18031 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN1P18031 ZNF444P1-201ENST00000559497 298 ntBASIC19.64■□□□□ 0.73
PTPN1P18031 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
PTPN1P18031 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN1P18031 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN1P18031 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN1P18031 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN1P18031 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
PTPN1P18031 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN1P18031 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PTPN1P18031 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN1P18031 BX323043.1-201ENST00000641006 1765 ntBASIC19.64■□□□□ 0.73
PTPN1P18031 AC018445.3-201ENST00000624177 1945 ntBASIC19.64■□□□□ 0.73
PTPN1P18031 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PTPN1P18031 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PTPN1P18031 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN1P18031 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PTPN1P18031 CROCCP3-202ENST00000420820 1947 ntBASIC19.63■□□□□ 0.73
PTPN1P18031 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN1P18031 ANO7L1-203ENST00000602586 1720 ntBASIC19.63■□□□□ 0.73
PTPN1P18031 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 AL163051.1-201ENST00000569214 1512 ntBASIC19.63■□□□□ 0.73
PTPN1P18031 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PTPN1P18031 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN1P18031 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN1P18031 FAM86EP-206ENST00000510506 987 ntBASIC19.63■□□□□ 0.73
PTPN1P18031 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN1P18031 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN1P18031 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN1P18031 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN1P18031 AL031598.1-201ENST00000561511 1773 ntBASIC19.62■□□□□ 0.73
PTPN1P18031 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTPN1P18031 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTPN1P18031 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms