Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.34■■□□□ 1.01
CAPN2P17655 TPSP2-201ENST00000561760 610 ntBASIC21.34■■□□□ 1.01
CAPN2P17655 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.34■■□□□ 1.01
CAPN2P17655 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.34■■□□□ 1.01
CAPN2P17655 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 AP001271.2-201ENST00000624018 1556 ntBASIC21.34■■□□□ 1.01
CAPN2P17655 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.34■■□□□ 1.01
CAPN2P17655 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CAPN2P17655 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.34■■□□□ 1.01
CAPN2P17655 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.33■■□□□ 1.01
CAPN2P17655 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CAPN2P17655 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN2P17655 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN2P17655 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
CAPN2P17655 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN2P17655 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.33■■□□□ 1.01
CAPN2P17655 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN2P17655 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN2P17655 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CAPN2P17655 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
CAPN2P17655 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN2P17655 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.33■■□□□ 1.01
CAPN2P17655 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.33■■□□□ 1.01
CAPN2P17655 AL732292.2-201ENST00000609649 430 ntBASIC21.33■■□□□ 1.01
CAPN2P17655 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.33■■□□□ 1
CAPN2P17655 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.33■■□□□ 1
CAPN2P17655 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.33■■□□□ 1
CAPN2P17655 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CAPN2P17655 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.33■■□□□ 1
CAPN2P17655 AC020907.5-201ENST00000624372 1936 ntBASIC21.33■■□□□ 1
CAPN2P17655 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.33■■□□□ 1
CAPN2P17655 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.32■■□□□ 1
CAPN2P17655 FZD10-202ENST00000539839 3282 ntBASIC21.32■■□□□ 1
CAPN2P17655 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.32■■□□□ 1
CAPN2P17655 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.32■■□□□ 1
CAPN2P17655 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.32■■□□□ 1
CAPN2P17655 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CAPN2P17655 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.32■■□□□ 1
CAPN2P17655 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.32■■□□□ 1
CAPN2P17655 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.32■■□□□ 1
CAPN2P17655 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CAPN2P17655 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CAPN2P17655 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.32■■□□□ 1
CAPN2P17655 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.32■■□□□ 1
CAPN2P17655 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.32■■□□□ 1
CAPN2P17655 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN2P17655 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.32■■□□□ 1
CAPN2P17655 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CAPN2P17655 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CAPN2P17655 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.31■■□□□ 1
CAPN2P17655 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.31■■□□□ 1
CAPN2P17655 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
CAPN2P17655 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.31■■□□□ 1
CAPN2P17655 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.31■■□□□ 1
CAPN2P17655 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.31■■□□□ 1
CAPN2P17655 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 TSPY22P-201ENST00000427496 604 ntBASIC21.31■■□□□ 1
CAPN2P17655 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.31■■□□□ 1
CAPN2P17655 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.31■■□□□ 1
CAPN2P17655 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.31■■□□□ 1
CAPN2P17655 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.31■■□□□ 1
CAPN2P17655 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.31■■□□□ 1
CAPN2P17655 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.31■■□□□ 1
CAPN2P17655 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CAPN2P17655 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN2P17655 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms