Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CDH1P12830 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDH1P12830 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDH1P12830 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH1P12830 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CDH1P12830 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH1P12830 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH1P12830 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH1P12830 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDH1P12830 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDH1P12830 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH1P12830 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH1P12830 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH1P12830 AL023803.3-201ENST00000615559 522 ntBASIC18.11■□□□□ 0.49
CDH1P12830 AC010947.1-201ENST00000623454 693 ntBASIC18.11■□□□□ 0.49
CDH1P12830 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH1P12830 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH1P12830 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDH1P12830 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH1P12830 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH1P12830 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH1P12830 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDH1P12830 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH1P12830 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 NOC2LP1-202ENST00000452600 2235 ntBASIC18.1■□□□□ 0.49
CDH1P12830 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH1P12830 GPAT2P1-201ENST00000444924 1672 ntBASIC18.1■□□□□ 0.49
CDH1P12830 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDH1P12830 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
CDH1P12830 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH1P12830 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CDH1P12830 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 CCR12P-201ENST00000446203 998 ntBASIC18.1■□□□□ 0.49
CDH1P12830 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.1■□□□□ 0.49
CDH1P12830 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH1P12830 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH1P12830 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH1P12830 AC116562.4-202ENST00000641738 218 ntBASIC18.1■□□□□ 0.49
CDH1P12830 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDH1P12830 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CDH1P12830 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH1P12830 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH1P12830 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH1P12830 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH1P12830 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH1P12830 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 INGX-201ENST00000359239 846 ntBASIC18.09■□□□□ 0.49
CDH1P12830 AL023284.2-201ENST00000405850 579 ntBASIC18.09■□□□□ 0.49
CDH1P12830 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH1P12830 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH1P12830 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.09■□□□□ 0.49
CDH1P12830 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH1P12830 AP003041.3-201ENST00000527151 707 ntBASIC18.09■□□□□ 0.49
CDH1P12830 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 NOC2LP2-201ENST00000407594 1944 ntBASIC18.09■□□□□ 0.49
CDH1P12830 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDH1P12830 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH1P12830 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH1P12830 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH1P12830 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH1P12830 MTMR9LP-203ENST00000426597 1545 ntBASIC18.08■□□□□ 0.49
CDH1P12830 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms