Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.74□□□□□ -0.05
PF4V1P10720 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.74□□□□□ -0.05
PF4V1P10720 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PF4V1P10720 AL358472.4-201ENST00000633140 710 ntBASIC14.74□□□□□ -0.05
PF4V1P10720 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PF4V1P10720 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PF4V1P10720 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PF4V1P10720 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.74□□□□□ -0.05
PF4V1P10720 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.74□□□□□ -0.05
PF4V1P10720 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.74□□□□□ -0.05
PF4V1P10720 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.74□□□□□ -0.05
PF4V1P10720 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.74□□□□□ -0.05
PF4V1P10720 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.73□□□□□ -0.05
PF4V1P10720 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.73□□□□□ -0.05
PF4V1P10720 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.73□□□□□ -0.05
PF4V1P10720 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PF4V1P10720 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
PF4V1P10720 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.73□□□□□ -0.05
PF4V1P10720 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.73□□□□□ -0.05
PF4V1P10720 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.73□□□□□ -0.05
PF4V1P10720 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PF4V1P10720 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PF4V1P10720 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.73□□□□□ -0.05
PF4V1P10720 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.73□□□□□ -0.05
PF4V1P10720 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.73□□□□□ -0.05
PF4V1P10720 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PF4V1P10720 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.73□□□□□ -0.05
PF4V1P10720 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.73□□□□□ -0.05
PF4V1P10720 AL023973.1-201ENST00000624619 620 ntBASIC14.73□□□□□ -0.05
PF4V1P10720 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.73□□□□□ -0.05
PF4V1P10720 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PF4V1P10720 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PF4V1P10720 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.73□□□□□ -0.05
PF4V1P10720 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PF4V1P10720 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PF4V1P10720 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PF4V1P10720 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.72□□□□□ -0.05
PF4V1P10720 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 AL049812.1-201ENST00000432563 2267 ntBASIC14.72□□□□□ -0.05
PF4V1P10720 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
PF4V1P10720 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.72□□□□□ -0.05
PF4V1P10720 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.72□□□□□ -0.05
PF4V1P10720 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.72□□□□□ -0.05
PF4V1P10720 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PF4V1P10720 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.72□□□□□ -0.05
PF4V1P10720 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.72□□□□□ -0.05
PF4V1P10720 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.72□□□□□ -0.05
PF4V1P10720 AL359075.1-203ENST00000462729 1002 ntBASIC14.72□□□□□ -0.05
PF4V1P10720 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.72□□□□□ -0.05
PF4V1P10720 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.72□□□□□ -0.05
PF4V1P10720 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.72□□□□□ -0.05
PF4V1P10720 AC011558.1-201ENST00000623459 338 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms