Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSF1P09603 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.07■□□□□ 0.16
CSF1P09603 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CSF1P09603 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.07■□□□□ 0.16
CSF1P09603 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.07■□□□□ 0.16
CSF1P09603 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.07■□□□□ 0.16
CSF1P09603 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CSF1P09603 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.07■□□□□ 0.16
CSF1P09603 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.07■□□□□ 0.16
CSF1P09603 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.07■□□□□ 0.16
CSF1P09603 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.07■□□□□ 0.16
CSF1P09603 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.07■□□□□ 0.16
CSF1P09603 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CSF1P09603 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.07■□□□□ 0.16
CSF1P09603 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.07■□□□□ 0.16
CSF1P09603 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.07■□□□□ 0.16
CSF1P09603 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CSF1P09603 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSF1P09603 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CSF1P09603 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CSF1P09603 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CSF1P09603 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.06■□□□□ 0.16
CSF1P09603 KRT17P1-201ENST00000399211 1546 ntBASIC16.06■□□□□ 0.16
CSF1P09603 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.06■□□□□ 0.16
CSF1P09603 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 KRT17P3-201ENST00000420566 1262 ntBASIC16.06■□□□□ 0.16
CSF1P09603 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.06■□□□□ 0.16
CSF1P09603 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.06■□□□□ 0.16
CSF1P09603 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 AL359736.2-201ENST00000621992 437 ntBASIC16.06■□□□□ 0.16
CSF1P09603 HLA-B-256ENST00000639848 1089 ntBASIC16.06■□□□□ 0.16
CSF1P09603 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.06■□□□□ 0.16
CSF1P09603 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSF1P09603 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CSF1P09603 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CSF1P09603 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSF1P09603 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CSF1P09603 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CSF1P09603 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSF1P09603 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSF1P09603 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSF1P09603 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.05■□□□□ 0.16
CSF1P09603 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.05■□□□□ 0.16
CSF1P09603 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CSF1P09603 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSF1P09603 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CSF1P09603 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CSF1P09603 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.05■□□□□ 0.16
CSF1P09603 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CSF1P09603 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.05■□□□□ 0.16
CSF1P09603 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.05■□□□□ 0.16
CSF1P09603 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSF1P09603 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CSF1P09603 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.05■□□□□ 0.16
CSF1P09603 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.05■□□□□ 0.16
CSF1P09603 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSF1P09603 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.05■□□□□ 0.16
CSF1P09603 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSF1P09603 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSF1P09603 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.05■□□□□ 0.16
CSF1P09603 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms