Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.72■□□□□ 0.59
RETP07949 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RETP07949 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.71■□□□□ 0.59
RETP07949 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RETP07949 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.71■□□□□ 0.59
RETP07949 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.71■□□□□ 0.59
RETP07949 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.71■□□□□ 0.59
RETP07949 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RETP07949 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.71■□□□□ 0.59
RETP07949 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.71■□□□□ 0.59
RETP07949 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.71■□□□□ 0.59
RETP07949 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RETP07949 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RETP07949 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RETP07949 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.71■□□□□ 0.59
RETP07949 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RETP07949 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.71■□□□□ 0.59
RETP07949 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.71■□□□□ 0.59
RETP07949 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.71■□□□□ 0.59
RETP07949 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RETP07949 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RETP07949 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.71■□□□□ 0.59
RETP07949 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.71■□□□□ 0.59
RETP07949 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.71■□□□□ 0.59
RETP07949 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RETP07949 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RETP07949 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RETP07949 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RETP07949 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RETP07949 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RETP07949 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RETP07949 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RETP07949 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RETP07949 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RETP07949 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.7■□□□□ 0.58
RETP07949 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.7■□□□□ 0.58
RETP07949 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.7■□□□□ 0.58
RETP07949 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RETP07949 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.7■□□□□ 0.58
RETP07949 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RETP07949 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.7■□□□□ 0.58
RETP07949 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
RETP07949 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RETP07949 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.69■□□□□ 0.58
RETP07949 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.69■□□□□ 0.58
RETP07949 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RETP07949 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RETP07949 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RETP07949 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RETP07949 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RETP07949 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RETP07949 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RETP07949 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.69■□□□□ 0.58
RETP07949 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.69■□□□□ 0.58
RETP07949 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.69■□□□□ 0.58
RETP07949 AC092183.1-201ENST00000469884 875 ntBASIC18.69■□□□□ 0.58
RETP07949 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RETP07949 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.69■□□□□ 0.58
RETP07949 AC138894.3-201ENST00000603787 634 ntBASIC18.69■□□□□ 0.58
RETP07949 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.69■□□□□ 0.58
RETP07949 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RETP07949 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RETP07949 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.69■□□□□ 0.58
RETP07949 AL391807.1-203ENST00000604392 2365 ntBASIC18.69■□□□□ 0.58
RETP07949 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RETP07949 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.69■□□□□ 0.58
RETP07949 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.69■□□□□ 0.58
RETP07949 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.69■□□□□ 0.58
RETP07949 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.68■□□□□ 0.58
RETP07949 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RETP07949 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RETP07949 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms