Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM3P06753 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TPM3P06753 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM3P06753 MIPEPP3-201ENST00000412105 444 ntBASIC20.84■□□□□ 0.93
TPM3P06753 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.84■□□□□ 0.93
TPM3P06753 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.84■□□□□ 0.93
TPM3P06753 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.84■□□□□ 0.93
TPM3P06753 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.84■□□□□ 0.93
TPM3P06753 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.84■□□□□ 0.93
TPM3P06753 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.84■□□□□ 0.93
TPM3P06753 AC092118.2-201ENST00000613495 667 ntBASIC20.84■□□□□ 0.93
TPM3P06753 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TPM3P06753 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TPM3P06753 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TPM3P06753 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM3P06753 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM3P06753 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TPM3P06753 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM3P06753 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM3P06753 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TPM3P06753 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TPM3P06753 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TPM3P06753 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TPM3P06753 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TPM3P06753 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TPM3P06753 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.83■□□□□ 0.93
TPM3P06753 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.83■□□□□ 0.93
TPM3P06753 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.83■□□□□ 0.93
TPM3P06753 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
TPM3P06753 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.83■□□□□ 0.93
TPM3P06753 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.83■□□□□ 0.93
TPM3P06753 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TPM3P06753 AC080038.1-201ENST00000611274 1154 ntBASIC20.83■□□□□ 0.93
TPM3P06753 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.83■□□□□ 0.93
TPM3P06753 HLA-B-256ENST00000639848 1089 ntBASIC20.83■□□□□ 0.93
TPM3P06753 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.83■□□□□ 0.93
TPM3P06753 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TPM3P06753 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.83■□□□□ 0.92
TPM3P06753 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
TPM3P06753 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TPM3P06753 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TPM3P06753 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM3P06753 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM3P06753 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.83■□□□□ 0.92
TPM3P06753 AC138028.4-201ENST00000564984 1845 ntBASIC20.83■□□□□ 0.92
TPM3P06753 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM3P06753 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM3P06753 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.82■□□□□ 0.92
TPM3P06753 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.82■□□□□ 0.92
TPM3P06753 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TPM3P06753 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TPM3P06753 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM3P06753 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
TPM3P06753 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.82■□□□□ 0.92
TPM3P06753 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM3P06753 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.82■□□□□ 0.92
TPM3P06753 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM3P06753 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.82■□□□□ 0.92
TPM3P06753 AC091874.3-201ENST00000512672 1195 ntBASIC20.82■□□□□ 0.92
TPM3P06753 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM3P06753 AL050303.2-201ENST00000619798 666 ntBASIC20.82■□□□□ 0.92
TPM3P06753 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 AC124067.4-201ENST00000519691 2379 ntBASIC20.82■□□□□ 0.92
TPM3P06753 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TPM3P06753 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM3P06753 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM3P06753 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM3P06753 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.81■□□□□ 0.92
TPM3P06753 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.81■□□□□ 0.92
TPM3P06753 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM3P06753 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms