Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRAP04437 MIR663A-201ENST00000385250 93 ntBASIC14.16□□□□□ -0.14
TCRAP04437 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.16□□□□□ -0.14
TCRAP04437 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.16□□□□□ -0.14
TCRAP04437 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRAP04437 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.16□□□□□ -0.14
TCRAP04437 AC080038.1-201ENST00000611274 1154 ntBASIC14.16□□□□□ -0.14
TCRAP04437 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.16□□□□□ -0.14
TCRAP04437 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRAP04437 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRAP04437 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TCRAP04437 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TCRAP04437 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TCRAP04437 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TCRAP04437 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TCRAP04437 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRAP04437 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TCRAP04437 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 KRT8P32-201ENST00000512863 1461 ntBASIC14.15□□□□□ -0.14
TCRAP04437 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRAP04437 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.15□□□□□ -0.14
TCRAP04437 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.15□□□□□ -0.14
TCRAP04437 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 AC060766.5-201ENST00000590539 871 ntBASIC14.15□□□□□ -0.14
TCRAP04437 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRAP04437 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.15□□□□□ -0.14
TCRAP04437 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TCRAP04437 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TCRAP04437 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRAP04437 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TCRAP04437 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TCRAP04437 KRT8P41-201ENST00000533985 1514 ntBASIC14.15□□□□□ -0.14
TCRAP04437 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRAP04437 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRAP04437 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TCRAP04437 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.15□□□□□ -0.15
TCRAP04437 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
TCRAP04437 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
TCRAP04437 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TCRAP04437 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRAP04437 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRAP04437 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRAP04437 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
TCRAP04437 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.14□□□□□ -0.15
TCRAP04437 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRAP04437 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRAP04437 C1QL1P1-201ENST00000568105 661 ntBASIC14.14□□□□□ -0.15
TCRAP04437 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRAP04437 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRAP04437 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRAP04437 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms