Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CD74P04233 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.63■□□□□ 0.09
CD74P04233 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD74P04233 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.62■□□□□ 0.09
CD74P04233 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.62■□□□□ 0.09
CD74P04233 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.62■□□□□ 0.09
CD74P04233 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.62■□□□□ 0.09
CD74P04233 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.62■□□□□ 0.09
CD74P04233 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CD74P04233 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 KRT8P3-201ENST00000519669 1449 ntBASIC15.62■□□□□ 0.09
CD74P04233 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.62■□□□□ 0.09
CD74P04233 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.62■□□□□ 0.09
CD74P04233 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CD74P04233 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.62■□□□□ 0.09
CD74P04233 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CD74P04233 AL121832.2-201ENST00000610979 668 ntBASIC15.62■□□□□ 0.09
CD74P04233 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.62■□□□□ 0.09
CD74P04233 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 MYLKP1-201ENST00000509077 1580 ntBASIC15.62■□□□□ 0.09
CD74P04233 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CD74P04233 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CD74P04233 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.61■□□□□ 0.09
CD74P04233 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.61■□□□□ 0.09
CD74P04233 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CD74P04233 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.61■□□□□ 0.09
CD74P04233 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.61■□□□□ 0.09
CD74P04233 POU5F1P3-201ENST00000428824 1078 ntBASIC15.61■□□□□ 0.09
CD74P04233 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.61■□□□□ 0.09
CD74P04233 AC120498.8-201ENST00000614275 531 ntBASIC15.61■□□□□ 0.09
CD74P04233 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.61■□□□□ 0.09
CD74P04233 PP12613-201ENST00000424958 2230 ntBASIC15.61■□□□□ 0.09
CD74P04233 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CD74P04233 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.61■□□□□ 0.09
CD74P04233 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CD74P04233 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.61■□□□□ 0.09
CD74P04233 HTR7P1-202ENST00000624664 4411 ntBASIC15.61■□□□□ 0.09
CD74P04233 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CD74P04233 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CD74P04233 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.6■□□□□ 0.09
CD74P04233 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CD74P04233 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.6■□□□□ 0.09
CD74P04233 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.6■□□□□ 0.09
CD74P04233 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.6■□□□□ 0.09
CD74P04233 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CD74P04233 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.6■□□□□ 0.09
CD74P04233 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 AC026271.2-201ENST00000428091 497 ntBASIC15.6■□□□□ 0.09
CD74P04233 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.6■□□□□ 0.09
CD74P04233 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.6■□□□□ 0.09
CD74P04233 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.6■□□□□ 0.09
CD74P04233 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CD74P04233 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.6■□□□□ 0.09
CD74P04233 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.6■□□□□ 0.09
CD74P04233 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CD74P04233 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CD74P04233 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.6■□□□□ 0.09
CD74P04233 AC006116.8-202ENST00000587620 1550 ntBASIC15.6■□□□□ 0.09
CD74P04233 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms