Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC099778.1-201ENST00000568593 1911 ntBASIC11.56□□□□□ -0.56
APOBP04114 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
APOBP04114 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC11.56□□□□□ -0.56
APOBP04114 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.56□□□□□ -0.56
APOBP04114 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.56□□□□□ -0.56
APOBP04114 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
APOBP04114 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
APOBP04114 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC11.56□□□□□ -0.56
APOBP04114 AC023274.1-201ENST00000418278 595 ntBASIC11.56□□□□□ -0.56
APOBP04114 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
APOBP04114 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
APOBP04114 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.56□□□□□ -0.56
APOBP04114 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.56□□□□□ -0.56
APOBP04114 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.56□□□□□ -0.56
APOBP04114 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
APOBP04114 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.56□□□□□ -0.56
APOBP04114 AC106028.4-201ENST00000614509 607 ntBASIC11.56□□□□□ -0.56
APOBP04114 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
APOBP04114 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
APOBP04114 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 AC092910.1-201ENST00000482027 1129 ntBASIC11.55□□□□□ -0.56
APOBP04114 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.55□□□□□ -0.56
APOBP04114 KRT18P41-201ENST00000518924 1277 ntBASIC11.55□□□□□ -0.56
APOBP04114 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC11.55□□□□□ -0.56
APOBP04114 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.55□□□□□ -0.56
APOBP04114 MIR1199-201ENST00000621445 119 ntBASIC11.55□□□□□ -0.56
APOBP04114 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
APOBP04114 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC11.55□□□□□ -0.56
APOBP04114 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC11.55□□□□□ -0.56
APOBP04114 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 RPS2P28-201ENST00000314255 741 ntBASIC11.55□□□□□ -0.56
APOBP04114 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
APOBP04114 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.55□□□□□ -0.56
APOBP04114 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 AC112907.3-201ENST00000577781 2400 ntBASIC11.55□□□□□ -0.56
APOBP04114 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 PWWP2AP1-201ENST00000429776 2273 ntBASIC11.55□□□□□ -0.56
APOBP04114 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 AC011840.4-201ENST00000578471 627 ntBASIC11.55□□□□□ -0.56
APOBP04114 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 USP39-204ENST00000409766 2033 ntTSL 2 BASIC11.55□□□□□ -0.56
APOBP04114 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 Z82202.1-201ENST00000623446 1880 ntBASIC11.55□□□□□ -0.56
APOBP04114 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.55□□□□□ -0.56
APOBP04114 AC004832.2-201ENST00000426397 482 ntBASIC11.55□□□□□ -0.56
APOBP04114 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.55□□□□□ -0.56
APOBP04114 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.55□□□□□ -0.56
APOBP04114 AC011467.2-201ENST00000598425 242 ntBASIC11.55□□□□□ -0.56
APOBP04114 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.55□□□□□ -0.56
APOBP04114 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.55□□□□□ -0.56
APOBP04114 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOBP04114 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
APOBP04114 KRT8P32-201ENST00000512863 1461 ntBASIC11.54□□□□□ -0.56
APOBP04114 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
APOBP04114 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.54□□□□□ -0.56
APOBP04114 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
APOBP04114 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.54□□□□□ -0.56
APOBP04114 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC11.54□□□□□ -0.56
APOBP04114 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC11.54□□□□□ -0.56
APOBP04114 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
APOBP04114 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC11.54□□□□□ -0.56
APOBP04114 PALM-208ENST00000592155 2272 ntTSL 4 BASIC11.54□□□□□ -0.56
APOBP04114 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.54□□□□□ -0.56
APOBP04114 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.54□□□□□ -0.56
APOBP04114 YBX1P5-201ENST00000509441 847 ntBASIC11.54□□□□□ -0.56
APOBP04114 MIR4469-201ENST00000583919 79 ntBASIC11.54□□□□□ -0.56
APOBP04114 NARF-204ENST00000390006 1766 ntTSL 2 BASIC11.54□□□□□ -0.56
APOBP04114 MED17-221ENST00000639724 2317 ntTSL 5 BASIC11.54□□□□□ -0.56
APOBP04114 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms