Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.05■□□□□ 0.8
TIMP1P01033 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.05■□□□□ 0.8
TIMP1P01033 LINC01521-201ENST00000504184 1943 ntBASIC20.05■□□□□ 0.8
TIMP1P01033 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TIMP1P01033 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TIMP1P01033 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TIMP1P01033 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TIMP1P01033 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TIMP1P01033 IRX1P1-201ENST00000438849 1838 ntBASIC20.04■□□□□ 0.8
TIMP1P01033 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TIMP1P01033 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMP1P01033 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMP1P01033 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TIMP1P01033 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TIMP1P01033 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMP1P01033 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TIMP1P01033 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TIMP1P01033 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TIMP1P01033 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMP1P01033 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TIMP1P01033 GPX1P2-201ENST00000429271 606 ntBASIC20.04■□□□□ 0.8
TIMP1P01033 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
TIMP1P01033 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TIMP1P01033 AC113404.2-201ENST00000507884 177 ntBASIC20.04■□□□□ 0.8
TIMP1P01033 AC009533.2-201ENST00000543664 586 ntBASIC20.04■□□□□ 0.8
TIMP1P01033 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMP1P01033 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.04■□□□□ 0.8
TIMP1P01033 AC027796.2-201ENST00000575326 344 ntBASIC20.04■□□□□ 0.8
TIMP1P01033 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TIMP1P01033 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMP1P01033 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMP1P01033 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TIMP1P01033 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TIMP1P01033 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
TIMP1P01033 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TIMP1P01033 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
TIMP1P01033 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TIMP1P01033 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMP1P01033 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TIMP1P01033 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TIMP1P01033 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TIMP1P01033 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.03■□□□□ 0.8
TIMP1P01033 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.03■□□□□ 0.8
TIMP1P01033 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.03■□□□□ 0.8
TIMP1P01033 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.03■□□□□ 0.8
TIMP1P01033 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 RPS2P1-201ENST00000434010 821 ntBASIC20.03■□□□□ 0.8
TIMP1P01033 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TIMP1P01033 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.03■□□□□ 0.8
TIMP1P01033 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.03■□□□□ 0.8
TIMP1P01033 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.03■□□□□ 0.8
TIMP1P01033 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.03■□□□□ 0.8
TIMP1P01033 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 INTS4P1-201ENST00000438455 1935 ntBASIC20.03■□□□□ 0.8
TIMP1P01033 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TIMP1P01033 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMP1P01033 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TIMP1P01033 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.02■□□□□ 0.8
TIMP1P01033 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TIMP1P01033 AP005117.1-201ENST00000584346 1413 ntBASIC20.02■□□□□ 0.8
TIMP1P01033 AL163051.1-201ENST00000569214 1512 ntBASIC20.02■□□□□ 0.8
TIMP1P01033 HLA-J-201ENST00000462773 1622 ntBASIC20.02■□□□□ 0.8
TIMP1P01033 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TIMP1P01033 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TIMP1P01033 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TIMP1P01033 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TIMP1P01033 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TIMP1P01033 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TIMP1P01033 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.02■□□□□ 0.8
TIMP1P01033 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.02■□□□□ 0.8
TIMP1P01033 AC068472.1-201ENST00000474589 881 ntBASIC20.02■□□□□ 0.8
TIMP1P01033 AC112482.1-201ENST00000492080 688 ntBASIC20.02■□□□□ 0.8
TIMP1P01033 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.02■□□□□ 0.8
TIMP1P01033 MIR3687-2-201ENST00000577708 61 ntBASIC20.02■□□□□ 0.8
TIMP1P01033 MIR3687-1-201ENST00000614492 61 ntBASIC20.02■□□□□ 0.8
TIMP1P01033 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
TIMP1P01033 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.02■□□□□ 0.8
TIMP1P01033 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.02■□□□□ 0.8
TIMP1P01033 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.02■□□□□ 0.8
TIMP1P01033 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TIMP1P01033 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
TIMP1P01033 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TIMP1P01033 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
TIMP1P01033 AC022898.2-201ENST00000616822 1312 ntBASIC20.02■□□□□ 0.79
TIMP1P01033 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TIMP1P01033 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TIMP1P01033 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TIMP1P01033 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TIMP1P01033 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TIMP1P01033 RPS8P6-201ENST00000426177 609 ntBASIC20.01■□□□□ 0.79
TIMP1P01033 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TIMP1P01033 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms