Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.55■□□□□ 0.08
ABCA1O95477 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.55■□□□□ 0.08
ABCA1O95477 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.55■□□□□ 0.08
ABCA1O95477 AL031008.1-201ENST00000619963 541 ntBASIC15.55■□□□□ 0.08
ABCA1O95477 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.55■□□□□ 0.08
ABCA1O95477 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
ABCA1O95477 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.55■□□□□ 0.08
ABCA1O95477 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.55■□□□□ 0.08
ABCA1O95477 KRT18P1-202ENST00000452408 1331 ntBASIC15.55■□□□□ 0.08
ABCA1O95477 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.55■□□□□ 0.08
ABCA1O95477 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ABCA1O95477 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.55■□□□□ 0.08
ABCA1O95477 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.55■□□□□ 0.08
ABCA1O95477 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.55■□□□□ 0.08
ABCA1O95477 AC139530.3-201ENST00000620344 690 ntBASIC15.55■□□□□ 0.08
ABCA1O95477 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.55■□□□□ 0.08
ABCA1O95477 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.55■□□□□ 0.08
ABCA1O95477 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.55■□□□□ 0.08
ABCA1O95477 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ABCA1O95477 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ABCA1O95477 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.54■□□□□ 0.08
ABCA1O95477 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
ABCA1O95477 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ABCA1O95477 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ABCA1O95477 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.54■□□□□ 0.08
ABCA1O95477 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.54■□□□□ 0.08
ABCA1O95477 KRT8P26-201ENST00000534154 1276 ntBASIC15.54■□□□□ 0.08
ABCA1O95477 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.54■□□□□ 0.08
ABCA1O95477 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
ABCA1O95477 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.54■□□□□ 0.08
ABCA1O95477 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ABCA1O95477 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.54■□□□□ 0.08
ABCA1O95477 AL157888.1-201ENST00000631930 593 ntBASIC15.54■□□□□ 0.08
ABCA1O95477 LINC00167-201ENST00000530583 1419 ntBASIC15.54■□□□□ 0.08
ABCA1O95477 AL391807.1-203ENST00000604392 2365 ntBASIC15.54■□□□□ 0.08
ABCA1O95477 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.54■□□□□ 0.08
ABCA1O95477 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.54■□□□□ 0.08
ABCA1O95477 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.54■□□□□ 0.08
ABCA1O95477 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 AC106795.1-205ENST00000512851 1056 ntBASIC15.54■□□□□ 0.08
ABCA1O95477 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ABCA1O95477 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
ABCA1O95477 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.54■□□□□ 0.08
ABCA1O95477 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.54■□□□□ 0.08
ABCA1O95477 AC009237.14-201ENST00000609975 1594 ntBASIC15.53■□□□□ 0.08
ABCA1O95477 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.53■□□□□ 0.08
ABCA1O95477 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ABCA1O95477 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.53■□□□□ 0.08
ABCA1O95477 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ABCA1O95477 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
ABCA1O95477 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ABCA1O95477 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
ABCA1O95477 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.53■□□□□ 0.08
ABCA1O95477 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.53■□□□□ 0.08
ABCA1O95477 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.53■□□□□ 0.08
ABCA1O95477 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms