Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAF4O95104 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SCAF4O95104 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SCAF4O95104 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAF4O95104 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SCAF4O95104 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAF4O95104 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SCAF4O95104 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAF4O95104 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.22■□□□□ 0.03
SCAF4O95104 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
SCAF4O95104 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.22■□□□□ 0.03
SCAF4O95104 CD99P1-205ENST00000527459 561 ntBASIC15.22■□□□□ 0.03
SCAF4O95104 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SCAF4O95104 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SCAF4O95104 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SCAF4O95104 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAF4O95104 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SCAF4O95104 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.21■□□□□ 0.03
SCAF4O95104 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.21■□□□□ 0.03
SCAF4O95104 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.21■□□□□ 0.03
SCAF4O95104 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
SCAF4O95104 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.21■□□□□ 0.03
SCAF4O95104 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.21■□□□□ 0.03
SCAF4O95104 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.21■□□□□ 0.03
SCAF4O95104 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.21■□□□□ 0.03
SCAF4O95104 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.21■□□□□ 0.03
SCAF4O95104 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 MYC-208ENST00000641036 567 ntBASIC15.21■□□□□ 0.03
SCAF4O95104 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.21■□□□□ 0.03
SCAF4O95104 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCAF4O95104 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.21■□□□□ 0.03
SCAF4O95104 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.21■□□□□ 0.03
SCAF4O95104 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.21■□□□□ 0.03
SCAF4O95104 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
SCAF4O95104 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SCAF4O95104 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.21■□□□□ 0.02
SCAF4O95104 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCAF4O95104 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SCAF4O95104 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCAF4O95104 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCAF4O95104 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
SCAF4O95104 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SCAF4O95104 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SCAF4O95104 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.21■□□□□ 0.02
SCAF4O95104 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCAF4O95104 SDHAP1-207ENST00000440850 2000 ntBASIC15.21■□□□□ 0.02
SCAF4O95104 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
SCAF4O95104 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
SCAF4O95104 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.2■□□□□ 0.02
SCAF4O95104 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAF4O95104 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.2■□□□□ 0.02
SCAF4O95104 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.2■□□□□ 0.02
SCAF4O95104 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.2■□□□□ 0.02
SCAF4O95104 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms