Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GFRA3O60609 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18■□□□□ 0.47
GFRA3O60609 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18■□□□□ 0.47
GFRA3O60609 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18■□□□□ 0.47
GFRA3O60609 RNA5SP421-201ENST00000516864 134 ntBASIC18■□□□□ 0.47
GFRA3O60609 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18■□□□□ 0.47
GFRA3O60609 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18■□□□□ 0.47
GFRA3O60609 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GFRA3O60609 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18■□□□□ 0.47
GFRA3O60609 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18■□□□□ 0.47
GFRA3O60609 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18■□□□□ 0.47
GFRA3O60609 MIR6752-201ENST00000618442 71 ntBASIC18■□□□□ 0.47
GFRA3O60609 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18■□□□□ 0.47
GFRA3O60609 GOLGA2P11-201ENST00000562660 1621 ntBASIC18■□□□□ 0.47
GFRA3O60609 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
GFRA3O60609 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GFRA3O60609 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GFRA3O60609 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
GFRA3O60609 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GFRA3O60609 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18■□□□□ 0.47
GFRA3O60609 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GFRA3O60609 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFRA3O60609 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GFRA3O60609 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.99■□□□□ 0.47
GFRA3O60609 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.99■□□□□ 0.47
GFRA3O60609 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFRA3O60609 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFRA3O60609 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
GFRA3O60609 MRPL20P1-201ENST00000400819 433 ntBASIC17.99■□□□□ 0.47
GFRA3O60609 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.99■□□□□ 0.47
GFRA3O60609 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFRA3O60609 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.99■□□□□ 0.47
GFRA3O60609 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.99■□□□□ 0.47
GFRA3O60609 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GFRA3O60609 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.99■□□□□ 0.47
GFRA3O60609 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.99■□□□□ 0.47
GFRA3O60609 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
GFRA3O60609 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GFRA3O60609 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.99■□□□□ 0.47
GFRA3O60609 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.99■□□□□ 0.47
GFRA3O60609 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GFRA3O60609 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
GFRA3O60609 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFRA3O60609 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GFRA3O60609 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.98■□□□□ 0.47
GFRA3O60609 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 OR8S1-201ENST00000310194 1080 ntBASIC17.98■□□□□ 0.47
GFRA3O60609 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.98■□□□□ 0.47
GFRA3O60609 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
GFRA3O60609 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.98■□□□□ 0.47
GFRA3O60609 MEIS3P1-201ENST00000495167 958 ntBASIC17.98■□□□□ 0.47
GFRA3O60609 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.98■□□□□ 0.47
GFRA3O60609 NKAPP1-205ENST00000585790 367 ntBASIC17.98■□□□□ 0.47
GFRA3O60609 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
GFRA3O60609 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.98■□□□□ 0.47
GFRA3O60609 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GFRA3O60609 PGM5P2-202ENST00000637225 1043 ntBASIC17.98■□□□□ 0.47
GFRA3O60609 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
GFRA3O60609 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
GFRA3O60609 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
GFRA3O60609 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
GFRA3O60609 AC008556.1-201ENST00000610908 2040 ntBASIC17.98■□□□□ 0.47
GFRA3O60609 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GFRA3O60609 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.98■□□□□ 0.47
GFRA3O60609 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
GFRA3O60609 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFRA3O60609 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.97■□□□□ 0.47
GFRA3O60609 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.97■□□□□ 0.47
GFRA3O60609 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.97■□□□□ 0.47
GFRA3O60609 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.97■□□□□ 0.47
GFRA3O60609 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFRA3O60609 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.97■□□□□ 0.47
GFRA3O60609 SIGLEC30P-201ENST00000455569 941 ntBASIC17.97■□□□□ 0.47
GFRA3O60609 TERF1P3-201ENST00000505638 1227 ntBASIC17.97■□□□□ 0.47
GFRA3O60609 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.97■□□□□ 0.47
GFRA3O60609 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.97■□□□□ 0.47
GFRA3O60609 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.97■□□□□ 0.47
GFRA3O60609 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.97■□□□□ 0.47
GFRA3O60609 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.97■□□□□ 0.47
GFRA3O60609 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.97■□□□□ 0.47
GFRA3O60609 AP000867.4-201ENST00000641616 219 ntBASIC17.97■□□□□ 0.47
GFRA3O60609 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GFRA3O60609 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFRA3O60609 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFRA3O60609 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.97■□□□□ 0.47
GFRA3O60609 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.97■□□□□ 0.47
GFRA3O60609 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GFRA3O60609 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
GFRA3O60609 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.97■□□□□ 0.47
GFRA3O60609 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GFRA3O60609 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms