Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX3O60493 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX3O60493 KRT18P11-201ENST00000435214 1283 ntBASIC18.31■□□□□ 0.52
SNX3O60493 TUBB8P6-201ENST00000436895 1288 ntBASIC18.31■□□□□ 0.52
SNX3O60493 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX3O60493 DUX4L16-201ENST00000555130 1264 ntBASIC18.31■□□□□ 0.52
SNX3O60493 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX3O60493 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX3O60493 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNX3O60493 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX3O60493 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNX3O60493 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX3O60493 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX3O60493 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.31■□□□□ 0.52
SNX3O60493 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX3O60493 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SNX3O60493 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX3O60493 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX3O60493 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX3O60493 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX3O60493 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX3O60493 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX3O60493 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNX3O60493 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNX3O60493 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SNX3O60493 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.3■□□□□ 0.52
SNX3O60493 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.3■□□□□ 0.52
SNX3O60493 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX3O60493 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX3O60493 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX3O60493 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX3O60493 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNX3O60493 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SNX3O60493 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNX3O60493 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX3O60493 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX3O60493 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX3O60493 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX3O60493 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 RPS2P52-201ENST00000469610 820 ntBASIC18.29■□□□□ 0.52
SNX3O60493 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 AL121761.2-201ENST00000598007 1648 ntBASIC18.29■□□□□ 0.52
SNX3O60493 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX3O60493 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX3O60493 AL096828.2-201ENST00000567259 1965 ntBASIC18.29■□□□□ 0.52
SNX3O60493 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNX3O60493 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX3O60493 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX3O60493 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX3O60493 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 AL357033.4-201ENST00000617703 1807 ntBASIC18.28■□□□□ 0.52
SNX3O60493 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SNX3O60493 KRT8P32-201ENST00000512863 1461 ntBASIC18.28■□□□□ 0.52
SNX3O60493 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SNX3O60493 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX3O60493 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX3O60493 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.28■□□□□ 0.52
SNX3O60493 AC005181.1-201ENST00000604782 1256 ntBASIC18.28■□□□□ 0.52
SNX3O60493 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX3O60493 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX3O60493 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms