Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.86■□□□□ 0.77
HOXA2O43364 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HOXA2O43364 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA2O43364 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
HOXA2O43364 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
HOXA2O43364 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.86■□□□□ 0.77
HOXA2O43364 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA2O43364 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.86■□□□□ 0.77
HOXA2O43364 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.86■□□□□ 0.77
HOXA2O43364 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA2O43364 AC104692.2-201ENST00000603054 253 ntBASIC19.86■□□□□ 0.77
HOXA2O43364 AL353801.3-201ENST00000609898 542 ntBASIC19.86■□□□□ 0.77
HOXA2O43364 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA2O43364 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA2O43364 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA2O43364 AL032819.2-201ENST00000624543 2162 ntBASIC19.85■□□□□ 0.77
HOXA2O43364 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA2O43364 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA2O43364 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA2O43364 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA2O43364 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA2O43364 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HOXA2O43364 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA2O43364 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXA2O43364 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXA2O43364 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA2O43364 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HOXA2O43364 KRT16P4-201ENST00000453883 522 ntBASIC19.85■□□□□ 0.77
HOXA2O43364 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA2O43364 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA2O43364 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXA2O43364 AL662844.1-201ENST00000546340 181 ntBASIC19.85■□□□□ 0.77
HOXA2O43364 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA2O43364 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXA2O43364 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.85■□□□□ 0.77
HOXA2O43364 AL158211.5-201ENST00000623583 2518 ntBASIC19.85■□□□□ 0.77
HOXA2O43364 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HOXA2O43364 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HOXA2O43364 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA2O43364 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA2O43364 MTMR9LP-203ENST00000426597 1545 ntBASIC19.85■□□□□ 0.77
HOXA2O43364 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA2O43364 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA2O43364 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA2O43364 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXA2O43364 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.84■□□□□ 0.77
HOXA2O43364 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXA2O43364 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
HOXA2O43364 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HOXA2O43364 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HOXA2O43364 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
HOXA2O43364 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXA2O43364 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXA2O43364 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXA2O43364 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXA2O43364 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HOXA2O43364 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HOXA2O43364 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 NSUN5P1-202ENST00000421140 1535 ntBASIC19.84■□□□□ 0.77
HOXA2O43364 NSUN5P2-203ENST00000457352 1529 ntBASIC19.84■□□□□ 0.77
HOXA2O43364 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HOXA2O43364 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA2O43364 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXA2O43364 PCDHAC2-203ENST00000615316 3011 ntBASIC19.84■□□□□ 0.77
HOXA2O43364 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA2O43364 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
HOXA2O43364 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA2O43364 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXA2O43364 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA2O43364 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
HOXA2O43364 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA2O43364 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA2O43364 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA2O43364 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXA2O43364 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HOXA2O43364 MIR149-201ENST00000384879 89 ntBASIC19.83■□□□□ 0.77
HOXA2O43364 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms