Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.27■■□□□ 1
ATP2A1O14983 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.27■■□□□ 1
ATP2A1O14983 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.27■■□□□ 1
ATP2A1O14983 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.27■■□□□ 1
ATP2A1O14983 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 KRT8P50-201ENST00000562022 1438 ntBASIC21.27■■□□□ 1
ATP2A1O14983 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP2A1O14983 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
ATP2A1O14983 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.27■□□□□ 0.99
ATP2A1O14983 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ATP2A1O14983 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2A1O14983 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP2A1O14983 MTMR9LP-203ENST00000426597 1545 ntBASIC21.26■□□□□ 0.99
ATP2A1O14983 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2A1O14983 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2A1O14983 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.26■□□□□ 0.99
ATP2A1O14983 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2A1O14983 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ATP2A1O14983 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2A1O14983 IGHGP-201ENST00000390555 1178 ntBASIC21.26■□□□□ 0.99
ATP2A1O14983 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP2A1O14983 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATP2A1O14983 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ATP2A1O14983 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP2A1O14983 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2A1O14983 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2A1O14983 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2A1O14983 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP2A1O14983 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2A1O14983 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2A1O14983 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP2A1O14983 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
ATP2A1O14983 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2A1O14983 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2A1O14983 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ATP2A1O14983 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
ATP2A1O14983 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP2A1O14983 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP2A1O14983 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2A1O14983 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2A1O14983 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2A1O14983 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP2A1O14983 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2A1O14983 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2A1O14983 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2A1O14983 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2A1O14983 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP2A1O14983 GPR32P1-201ENST00000601788 811 ntBASIC21.25■□□□□ 0.99
ATP2A1O14983 AC024563.2-201ENST00000603282 481 ntBASIC21.25■□□□□ 0.99
ATP2A1O14983 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP2A1O14983 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
ATP2A1O14983 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2A1O14983 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2A1O14983 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2A1O14983 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2A1O14983 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATP2A1O14983 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP2A1O14983 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
ATP2A1O14983 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 AP000593.1-201ENST00000393668 712 ntBASIC21.24■□□□□ 0.99
ATP2A1O14983 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
ATP2A1O14983 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP2A1O14983 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 AC111152.3-201ENST00000569699 673 ntBASIC21.24■□□□□ 0.99
ATP2A1O14983 RN7SL510P-201ENST00000581311 263 ntBASIC21.24■□□□□ 0.99
ATP2A1O14983 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP2A1O14983 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP2A1O14983 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP2A1O14983 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ATP2A1O14983 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ATP2A1O14983 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2A1O14983 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP2A1O14983 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP2A1O14983 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2A1O14983 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP2A1O14983 TSPY19P-201ENST00000418461 509 ntBASIC21.23■□□□□ 0.99
ATP2A1O14983 TSPY18P-201ENST00000441642 509 ntBASIC21.23■□□□□ 0.99
ATP2A1O14983 AC012615.1-201ENST00000565797 1299 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms