Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3D1O14617 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.4■□□□□ 0.38
AP3D1O14617 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
AP3D1O14617 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.4■□□□□ 0.38
AP3D1O14617 RCC2P6-201ENST00000526625 1557 ntBASIC17.4■□□□□ 0.38
AP3D1O14617 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP3D1O14617 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP3D1O14617 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP3D1O14617 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.39■□□□□ 0.38
AP3D1O14617 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
AP3D1O14617 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP3D1O14617 KRT8P11-201ENST00000409686 1436 ntBASIC17.39■□□□□ 0.38
AP3D1O14617 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
AP3D1O14617 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
AP3D1O14617 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3D1O14617 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3D1O14617 AC079598.2-202ENST00000546624 1451 ntBASIC17.39■□□□□ 0.37
AP3D1O14617 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
AP3D1O14617 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.39■□□□□ 0.37
AP3D1O14617 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
AP3D1O14617 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
AP3D1O14617 AC091390.4-202ENST00000476426 537 ntBASIC17.39■□□□□ 0.37
AP3D1O14617 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.39■□□□□ 0.37
AP3D1O14617 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
AP3D1O14617 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3D1O14617 AC073195.1-201ENST00000607241 877 ntBASIC17.39■□□□□ 0.37
AP3D1O14617 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.39■□□□□ 0.37
AP3D1O14617 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
AP3D1O14617 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
AP3D1O14617 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3D1O14617 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3D1O14617 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
AP3D1O14617 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3D1O14617 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3D1O14617 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.38■□□□□ 0.37
AP3D1O14617 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3D1O14617 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
AP3D1O14617 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.38■□□□□ 0.37
AP3D1O14617 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
AP3D1O14617 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
AP3D1O14617 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
AP3D1O14617 FAM197Y1-201ENST00000421178 764 ntBASIC17.38■□□□□ 0.37
AP3D1O14617 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.38■□□□□ 0.37
AP3D1O14617 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3D1O14617 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.38■□□□□ 0.37
AP3D1O14617 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
AP3D1O14617 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
AP3D1O14617 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3D1O14617 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3D1O14617 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.38■□□□□ 0.37
AP3D1O14617 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.38■□□□□ 0.37
AP3D1O14617 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
AP3D1O14617 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3D1O14617 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
AP3D1O14617 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
AP3D1O14617 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.37■□□□□ 0.37
AP3D1O14617 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.37■□□□□ 0.37
AP3D1O14617 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3D1O14617 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3D1O14617 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3D1O14617 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.37■□□□□ 0.37
AP3D1O14617 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
AP3D1O14617 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.37■□□□□ 0.37
AP3D1O14617 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3D1O14617 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3D1O14617 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms