Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.73■□□□□ 0.75
SOX1O00570 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.73■□□□□ 0.75
SOX1O00570 ABCD1P5-201ENST00000445663 754 ntBASIC19.73■□□□□ 0.75
SOX1O00570 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.73■□□□□ 0.75
SOX1O00570 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.73■□□□□ 0.75
SOX1O00570 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 AC069262.1-201ENST00000539058 672 ntBASIC19.73■□□□□ 0.75
SOX1O00570 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.73■□□□□ 0.75
SOX1O00570 MTDHP4-201ENST00000600287 670 ntBASIC19.73■□□□□ 0.75
SOX1O00570 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.73■□□□□ 0.75
SOX1O00570 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SOX1O00570 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SOX1O00570 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SOX1O00570 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SOX1O00570 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SOX1O00570 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SOX1O00570 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SOX1O00570 CEND1P1-201ENST00000451006 455 ntBASIC19.72■□□□□ 0.75
SOX1O00570 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.72■□□□□ 0.75
SOX1O00570 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.72■□□□□ 0.75
SOX1O00570 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.72■□□□□ 0.75
SOX1O00570 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.72■□□□□ 0.75
SOX1O00570 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SOX1O00570 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SOX1O00570 ELL2P1-201ENST00000413990 1906 ntBASIC19.72■□□□□ 0.75
SOX1O00570 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.72■□□□□ 0.75
SOX1O00570 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.72■□□□□ 0.75
SOX1O00570 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.72■□□□□ 0.75
SOX1O00570 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SOX1O00570 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SOX1O00570 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.72■□□□□ 0.75
SOX1O00570 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.71■□□□□ 0.75
SOX1O00570 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 AC002310.6-201ENST00000624451 1377 ntBASIC19.71■□□□□ 0.75
SOX1O00570 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.71■□□□□ 0.75
SOX1O00570 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SOX1O00570 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SOX1O00570 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.71■□□□□ 0.75
SOX1O00570 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 MEIS3P1-201ENST00000495167 958 ntBASIC19.71■□□□□ 0.75
SOX1O00570 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.71■□□□□ 0.75
SOX1O00570 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.71■□□□□ 0.75
SOX1O00570 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.71■□□□□ 0.75
SOX1O00570 AC005225.4-201ENST00000557330 545 ntBASIC19.71■□□□□ 0.75
SOX1O00570 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.71■□□□□ 0.75
SOX1O00570 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.71■□□□□ 0.75
SOX1O00570 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX1O00570 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.71■□□□□ 0.75
SOX1O00570 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SOX1O00570 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SOX1O00570 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.71■□□□□ 0.75
SOX1O00570 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.71■□□□□ 0.75
SOX1O00570 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SOX1O00570 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SOX1O00570 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SOX1O00570 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.7■□□□□ 0.74
SOX1O00570 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SOX1O00570 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.7■□□□□ 0.74
SOX1O00570 AC245100.3-201ENST00000441281 285 ntBASIC19.7■□□□□ 0.74
SOX1O00570 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.7■□□□□ 0.74
SOX1O00570 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.7■□□□□ 0.74
SOX1O00570 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.7■□□□□ 0.74
SOX1O00570 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.7■□□□□ 0.74
SOX1O00570 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.7■□□□□ 0.74
SOX1O00570 Z92544.3-201ENST00000624747 417 ntBASIC19.7■□□□□ 0.74
SOX1O00570 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.7■□□□□ 0.74
SOX1O00570 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.7■□□□□ 0.74
SOX1O00570 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SOX1O00570 RCC2P3-201ENST00000418112 1537 ntBASIC19.7■□□□□ 0.74
SOX1O00570 AC097374.2-201ENST00000618617 1306 ntBASIC19.7■□□□□ 0.74
SOX1O00570 AP005212.1-201ENST00000581547 1997 ntBASIC19.7■□□□□ 0.74
SOX1O00570 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.7■□□□□ 0.74
SOX1O00570 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.7■□□□□ 0.74
SOX1O00570 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX1O00570 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SOX1O00570 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.69■□□□□ 0.74
SOX1O00570 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX1O00570 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX1O00570 HEIH-201ENST00000623091 1652 ntBASIC19.69■□□□□ 0.74
SOX1O00570 AC006128.1-201ENST00000624704 1661 ntBASIC19.69■□□□□ 0.74
SOX1O00570 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SOX1O00570 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.69■□□□□ 0.74
SOX1O00570 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX1O00570 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.69■□□□□ 0.74
SOX1O00570 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.69■□□□□ 0.74
SOX1O00570 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms