Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 SPDYE15P-201ENST00000424157 909 ntBASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 MCCD1P1-208ENST00000445732 328 ntBASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 LINC01311-201ENST00000565162 1445 ntBASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 ZNF444P1-201ENST00000559497 298 ntBASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 AC024243.1-201ENST00000609234 778 ntBASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 AL049812.1-201ENST00000432563 2267 ntBASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA2E9PIF3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 KRT8P3-201ENST00000519669 1449 ntBASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 MIR3180-5-201ENST00000583743 153 ntBASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 AC083849.1-201ENST00000615227 514 ntBASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 AC018445.3-201ENST00000624177 1945 ntBASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.91■□□□□ 0.3
NPIPA2E9PIF3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA2E9PIF3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms