Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 AC079834.2-201ENST00000609776 1949 ntBASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM88BA6NKF7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM88BA6NKF7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 NKAPP1-205ENST00000585790 367 ntBASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.53■■□□□ 1.04
TMEM88BA6NKF7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 AC002310.6-201ENST00000624451 1377 ntBASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 LAGE3P1-201ENST00000425356 484 ntBASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 KRT18P2-201ENST00000447938 1258 ntBASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 C20orf181-201ENST00000623918 480 ntBASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.52■■□□□ 1.04
TMEM88BA6NKF7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
TMEM88BA6NKF7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
TMEM88BA6NKF7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.52■■□□□ 1.03
TMEM88BA6NKF7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms