Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 AL645939.2-201ENST00000427340 991 ntBASIC17.71■□□□□ 0.43
CNOT1A5YKK6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 AL096865.1-201ENST00000606796 927 ntBASIC17.71■□□□□ 0.43
CNOT1A5YKK6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CNOT1A5YKK6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CNOT1A5YKK6 AC254562.1-201ENST00000417586 456 ntBASIC17.71■□□□□ 0.42
CNOT1A5YKK6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.71■□□□□ 0.42
CNOT1A5YKK6 RNA5SP416-201ENST00000516838 111 ntBASIC17.71■□□□□ 0.42
CNOT1A5YKK6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.71■□□□□ 0.42
CNOT1A5YKK6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.71■□□□□ 0.42
CNOT1A5YKK6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CNOT1A5YKK6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.71■□□□□ 0.42
CNOT1A5YKK6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.71■□□□□ 0.42
CNOT1A5YKK6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 AL512408.1-201ENST00000569378 2000 ntBASIC17.7■□□□□ 0.42
CNOT1A5YKK6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 MIR770-201ENST00000390219 98 ntBASIC17.7■□□□□ 0.42
CNOT1A5YKK6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 OR7E14P-202ENST00000530490 1290 ntBASIC17.7■□□□□ 0.42
CNOT1A5YKK6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT1A5YKK6 AC073314.1-201ENST00000568729 2216 ntBASIC17.69■□□□□ 0.42
CNOT1A5YKK6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 TP73-AS1-210ENST00000637775 1455 ntBASIC17.69■□□□□ 0.42
CNOT1A5YKK6 AC006333.2-201ENST00000607957 2099 ntBASIC17.69■□□□□ 0.42
CNOT1A5YKK6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 AC092667.1-201ENST00000434301 2586 ntBASIC17.69■□□□□ 0.42
CNOT1A5YKK6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 AC011467.4-201ENST00000594891 528 ntBASIC17.69■□□□□ 0.42
CNOT1A5YKK6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT1A5YKK6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 ABCD1P5-201ENST00000445663 754 ntBASIC17.68■□□□□ 0.42
CNOT1A5YKK6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT1A5YKK6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms