Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV2A0A0B4J234 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV2A0A0B4J234 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV2A0A0B4J234 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV2A0A0B4J234 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 AL023284.2-201ENST00000405850 579 ntBASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 AL390955.1-201ENST00000428694 934 ntBASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 MIR3180-5-201ENST00000583743 153 ntBASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 KRT8P7-201ENST00000533003 1432 ntBASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV2A0A0B4J234 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 AL031598.1-201ENST00000561511 1773 ntBASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV2A0A0B4J234 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms