Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 AC073648.6-201ENST00000641589 218 ntBASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 AC135050.7-201ENST00000624508 2218 ntBASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 AC112777.1-201ENST00000540175 1423 ntBASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 KRT8P32-201ENST00000512863 1461 ntBASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV30A0A087WSZ9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV30A0A087WSZ9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 AL162741.1-201ENST00000565563 1558 ntBASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 AC091390.4-202ENST00000476426 537 ntBASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 RPS2P4-201ENST00000476944 856 ntBASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 C1QBPP2-201ENST00000528754 825 ntBASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 RARRES2P10-201ENST00000564312 460 ntBASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 AC073195.1-201ENST00000607241 877 ntBASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms