Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 TSPY22P-201ENST00000427496 604 ntBASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 PRELID1P1-202ENST00000567272 903 ntBASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 AC012313.10-201ENST00000623509 926 ntBASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 FP475955.4-201ENST00000623131 1990 ntBASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSNK1G3Q9Y6M4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 IRX1P1-201ENST00000438849 1838 ntBASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 PVRIG2P-201ENST00000435460 978 ntBASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 NUS1P1-201ENST00000446295 882 ntBASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 AP002414.4-201ENST00000589764 1148 ntBASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CSNK1G3Q9Y6M4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms