Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB9Q9Y5E1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB9Q9Y5E1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHB9Q9Y5E1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB9Q9Y5E1 AC036111.1-201ENST00000533973 1582 ntBASIC18.89■□□□□ 0.62
PCDHB9Q9Y5E1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB9Q9Y5E1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB9Q9Y5E1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 MIR3180-5-201ENST00000583743 153 ntBASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB9Q9Y5E1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 AL441883.1-201ENST00000566170 1045 ntBASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB9Q9Y5E1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 AP000523.1-201ENST00000398242 1049 ntBASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB9Q9Y5E1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms