Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPA4Q9UI42 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPA4Q9UI42 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPA4Q9UI42 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPA4Q9UI42 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPA4Q9UI42 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPA4Q9UI42 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.17■□□□□ 0.98
CPA4Q9UI42 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPA4Q9UI42 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.17■□□□□ 0.98
CPA4Q9UI42 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.17■□□□□ 0.98
CPA4Q9UI42 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPA4Q9UI42 AC116407.3-201ENST00000623905 1129 ntBASIC21.17■□□□□ 0.98
CPA4Q9UI42 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPA4Q9UI42 FEM1AP3-201ENST00000403722 1741 ntBASIC21.17■□□□□ 0.98
CPA4Q9UI42 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CPA4Q9UI42 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.17■□□□□ 0.98
CPA4Q9UI42 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPA4Q9UI42 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 RCN1P2-201ENST00000398357 915 ntBASIC21.16■□□□□ 0.98
CPA4Q9UI42 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 AL691403.2-201ENST00000618460 490 ntBASIC21.16■□□□□ 0.98
CPA4Q9UI42 AL355877.3-201ENST00000622820 899 ntBASIC21.16■□□□□ 0.98
CPA4Q9UI42 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPA4Q9UI42 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
CPA4Q9UI42 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 FGFR3P6-201ENST00000457012 610 ntBASIC21.15■□□□□ 0.98
CPA4Q9UI42 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.15■□□□□ 0.98
CPA4Q9UI42 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.15■□□□□ 0.98
CPA4Q9UI42 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.15■□□□□ 0.98
CPA4Q9UI42 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.15■□□□□ 0.98
CPA4Q9UI42 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.15■□□□□ 0.98
CPA4Q9UI42 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.15■□□□□ 0.98
CPA4Q9UI42 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.15■□□□□ 0.98
CPA4Q9UI42 AC055717.3-201ENST00000622967 595 ntBASIC21.15■□□□□ 0.98
CPA4Q9UI42 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPA4Q9UI42 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CPA4Q9UI42 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPA4Q9UI42 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.14■□□□□ 0.98
CPA4Q9UI42 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPA4Q9UI42 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPA4Q9UI42 LINC01521-201ENST00000504184 1943 ntBASIC21.14■□□□□ 0.98
CPA4Q9UI42 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CPA4Q9UI42 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.14■□□□□ 0.97
CPA4Q9UI42 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.14■□□□□ 0.97
CPA4Q9UI42 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.14■□□□□ 0.97
CPA4Q9UI42 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPA4Q9UI42 MTDHP3-201ENST00000594186 672 ntBASIC21.14■□□□□ 0.97
CPA4Q9UI42 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPA4Q9UI42 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.14■□□□□ 0.97
CPA4Q9UI42 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPA4Q9UI42 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CPA4Q9UI42 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.14■□□□□ 0.97
CPA4Q9UI42 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.14■□□□□ 0.97
CPA4Q9UI42 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPA4Q9UI42 IRX1P1-201ENST00000438849 1838 ntBASIC21.13■□□□□ 0.97
CPA4Q9UI42 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.13■□□□□ 0.97
CPA4Q9UI42 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CPA4Q9UI42 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.13■□□□□ 0.97
CPA4Q9UI42 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CPA4Q9UI42 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.13■□□□□ 0.97
CPA4Q9UI42 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPA4Q9UI42 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.13■□□□□ 0.97
CPA4Q9UI42 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CPA4Q9UI42 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CPA4Q9UI42 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.13■□□□□ 0.97
CPA4Q9UI42 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPA4Q9UI42 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPA4Q9UI42 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPA4Q9UI42 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPA4Q9UI42 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms