Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
COMMD3Q9UBI1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
COMMD3Q9UBI1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 AC142381.2-201ENST00000566120 298 ntBASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 AC131212.1-201ENST00000613771 668 ntBASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COMMD3Q9UBI1 AC108860.2-201ENST00000562760 2183 ntBASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.38■□□□□ 0.21
COMMD3Q9UBI1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COMMD3Q9UBI1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 AD000864.1-201ENST00000624076 2295 ntBASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 REXO1L9P-201ENST00000604264 2108 ntBASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 AC093677.2-201ENST00000600169 1863 ntBASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 KRT18P61-201ENST00000585825 1298 ntBASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms