Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PARPBPQ9NWS1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.66■□□□□ 0.26
PARPBPQ9NWS1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PARPBPQ9NWS1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PARPBPQ9NWS1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PARPBPQ9NWS1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PARPBPQ9NWS1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PARPBPQ9NWS1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PARPBPQ9NWS1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 RCC2P3-201ENST00000418112 1537 ntBASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 INGX-201ENST00000359239 846 ntBASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 AC083906.6-201ENST00000641366 219 ntBASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PARPBPQ9NWS1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
PARPBPQ9NWS1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 AP000974.1-201ENST00000623909 2387 ntBASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 AC113347.1-201ENST00000413321 391 ntBASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 MIR3180-5-201ENST00000583743 153 ntBASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 GPAT2P1-201ENST00000444924 1672 ntBASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 AL049812.1-201ENST00000432563 2267 ntBASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PARPBPQ9NWS1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PARPBPQ9NWS1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms