Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AP006294.2-201ENST00000641667 209 ntBASIC17.3■□□□□ 0.36
POLE3Q9NRF9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 AL357033.4-201ENST00000617703 1807 ntBASIC17.3■□□□□ 0.36
POLE3Q9NRF9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 AP003071.4-201ENST00000562276 1284 ntBASIC17.29■□□□□ 0.36
POLE3Q9NRF9 MIR4785-201ENST00000585005 73 ntBASIC17.29■□□□□ 0.36
POLE3Q9NRF9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLE3Q9NRF9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 CRYGFP-201ENST00000418459 633 ntBASIC17.28■□□□□ 0.36
POLE3Q9NRF9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
POLE3Q9NRF9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 AC005082.1-201ENST00000413042 2259 ntBASIC17.27■□□□□ 0.36
POLE3Q9NRF9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 UNC93B2-201ENST00000285383 730 ntBASIC17.27■□□□□ 0.36
POLE3Q9NRF9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 MCCD1P1-208ENST00000445732 328 ntBASIC17.27■□□□□ 0.36
POLE3Q9NRF9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 AC008622.2-201ENST00000617006 1229 ntBASIC17.27■□□□□ 0.36
POLE3Q9NRF9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLE3Q9NRF9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLE3Q9NRF9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLE3Q9NRF9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLE3Q9NRF9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLE3Q9NRF9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms