Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 AC018470.1-201ENST00000624790 3129 ntBASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 LINC01568-207ENST00000641790 1380 ntBASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NECTIN3Q9NQS3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 TSPY14P-201ENST00000303979 915 ntBASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 EGLN1P1-201ENST00000531623 762 ntBASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 LINC01023-201ENST00000606054 436 ntBASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 AC097493.4-201ENST00000641197 219 ntBASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 AL133373.2-201ENST00000623187 2828 ntBASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 IRX1P1-201ENST00000438849 1838 ntBASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NECTIN3Q9NQS3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
NECTIN3Q9NQS3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
NECTIN3Q9NQS3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
NECTIN3Q9NQS3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
NECTIN3Q9NQS3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.83■□□□□ 0.45
NECTIN3Q9NQS3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NECTIN3Q9NQS3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.83■□□□□ 0.45
NECTIN3Q9NQS3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.83■□□□□ 0.45
NECTIN3Q9NQS3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.83■□□□□ 0.45
NECTIN3Q9NQS3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NECTIN3Q9NQS3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 AC145285.6-201ENST00000604632 637 ntBASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN3Q9NQS3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 AC090340.1-201ENST00000620778 4980 ntBASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms