Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRC4Q9NPP4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRC4Q9NPP4 NOC2LP1-202ENST00000452600 2235 ntBASIC20.21■□□□□ 0.83
NLRC4Q9NPP4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
NLRC4Q9NPP4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
NLRC4Q9NPP4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRC4Q9NPP4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 ABALON-201ENST00000629058 1903 ntBASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 PRORSD1P-201ENST00000295112 541 ntBASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRC4Q9NPP4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 HTR7P1-202ENST00000624664 4411 ntBASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 CD177P1-201ENST00000606252 935 ntBASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 FSCN1P1-201ENST00000568912 1481 ntBASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NLRC4Q9NPP4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 AC090340.1-201ENST00000620778 4980 ntBASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 AC142381.4-202ENST00000563973 229 ntBASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 AC008622.2-201ENST00000617006 1229 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms