Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 AC069262.1-201ENST00000539058 672 ntBASIC17.26■□□□□ 0.35
CHD8Q9HCK8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 AC007225.1-201ENST00000566331 1836 ntBASIC17.25■□□□□ 0.35
CHD8Q9HCK8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 AL109659.2-201ENST00000606809 1674 ntBASIC17.25■□□□□ 0.35
CHD8Q9HCK8 KRT8P7-201ENST00000533003 1432 ntBASIC17.25■□□□□ 0.35
CHD8Q9HCK8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 LAGE3P1-201ENST00000425356 484 ntBASIC17.25■□□□□ 0.35
CHD8Q9HCK8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.25■□□□□ 0.35
CHD8Q9HCK8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 AC018845.2-201ENST00000568326 409 ntBASIC17.24■□□□□ 0.35
CHD8Q9HCK8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 FBXW4P1-201ENST00000426721 2239 ntBASIC17.24■□□□□ 0.35
CHD8Q9HCK8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHD8Q9HCK8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 MIR661-201ENST00000384842 89 ntBASIC17.23■□□□□ 0.35
CHD8Q9HCK8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 PDPK2P-202ENST00000562415 1191 ntBASIC17.23■□□□□ 0.35
CHD8Q9HCK8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 AL138831.2-201ENST00000606564 490 ntBASIC17.23■□□□□ 0.35
CHD8Q9HCK8 AL513210.1-201ENST00000629608 234 ntBASIC17.23■□□□□ 0.35
CHD8Q9HCK8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 GUSBP5-202ENST00000510805 1989 ntBASIC17.23■□□□□ 0.35
CHD8Q9HCK8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD8Q9HCK8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 INTS4P1-201ENST00000438455 1935 ntBASIC17.22■□□□□ 0.35
CHD8Q9HCK8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 AC109322.1-201ENST00000524499 1264 ntBASIC17.22■□□□□ 0.35
CHD8Q9HCK8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 AC006128.1-201ENST00000624704 1661 ntBASIC17.22■□□□□ 0.35
CHD8Q9HCK8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms