Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 RCN1P2-201ENST00000398357 915 ntBASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 TEX21P-204ENST00000641479 1693 ntBASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 UPF3AP3-201ENST00000420996 769 ntBASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 AC145285.3-201ENST00000564603 959 ntBASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZFYVE28Q9HCC9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 PMS2P2-201ENST00000425039 1128 ntBASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 AC098831.1-202ENST00000438821 336 ntBASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 AL355385.1-201ENST00000606123 409 ntBASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 FAM197Y3-203ENST00000618346 717 ntBASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 AC104109.2-201ENST00000602919 1418 ntBASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 AC007375.3-201ENST00000600936 2314 ntBASIC21.2■□□□□ 0.98
ZFYVE28Q9HCC9 TCF3P1-201ENST00000423021 1937 ntBASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 AC140113.2-201ENST00000604370 208 ntBASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZFYVE28Q9HCC9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 MED15P5-201ENST00000423150 992 ntBASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 AL356488.2-201ENST00000602755 427 ntBASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 TP73-AS1-210ENST00000637775 1455 ntBASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.18■□□□□ 0.98
ZFYVE28Q9HCC9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms