Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UPF2Q9HAU5 ESPNP-201ENST00000270691 2015 ntBASIC22.86■■□□□ 1.25
UPF2Q9HAU5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 SLC29A4P1-201ENST00000398760 971 ntBASIC22.85■■□□□ 1.25
UPF2Q9HAU5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 GNAS-203ENST00000306120 1878 ntBASIC22.85■■□□□ 1.25
UPF2Q9HAU5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 AC135776.1-201ENST00000319817 2481 ntBASIC22.85■■□□□ 1.25
UPF2Q9HAU5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
UPF2Q9HAU5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.84■■□□□ 1.25
UPF2Q9HAU5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 MTMR9LP-203ENST00000426597 1545 ntBASIC22.84■■□□□ 1.25
UPF2Q9HAU5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 AC083906.2-201ENST00000511578 360 ntBASIC22.84■■□□□ 1.25
UPF2Q9HAU5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 MIR4758-201ENST00000577688 71 ntBASIC22.84■■□□□ 1.25
UPF2Q9HAU5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 AC008687.6-201ENST00000596318 630 ntBASIC22.84■■□□□ 1.25
UPF2Q9HAU5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
UPF2Q9HAU5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 SOX15-203ENST00000570788 1093 ntBASIC22.83■■□□□ 1.25
UPF2Q9HAU5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 HLA-A-209ENST00000638375 975 ntBASIC22.83■■□□□ 1.25
UPF2Q9HAU5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
UPF2Q9HAU5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
UPF2Q9HAU5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.83■■□□□ 1.24
UPF2Q9HAU5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.24
UPF2Q9HAU5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
UPF2Q9HAU5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.82■■□□□ 1.24
UPF2Q9HAU5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms