Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 KRT18P48-201ENST00000434763 852 ntBASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 UNC93B7-201ENST00000509439 705 ntBASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 AL512604.3-201ENST00000569583 964 ntBASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MIR3180-1-201ENST00000580374 94 ntBASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MIR3180-3-201ENST00000584616 94 ntBASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 AC011498.5-201ENST00000592027 486 ntBASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 DBP-204ENST00000599385 709 ntTSL 3 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 AC069148.1-201ENST00000608741 768 ntBASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 AC068587.9-201ENST00000641814 219 ntBASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 AL162741.1-201ENST00000565563 1558 ntBASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 AL109659.2-201ENST00000606809 1674 ntBASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
KRTAP4-3Q9BYR4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms