Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 KRT18P35-201ENST00000510488 1269 ntBASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 AL590326.2-201ENST00000625139 305 ntBASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF4Q9BUZ4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 CRYGFP-201ENST00000418459 633 ntBASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 EGLN1P1-201ENST00000531623 762 ntBASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAF4Q9BUZ4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 AC073508.3-201ENST00000619697 1419 ntBASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 TSPY14P-201ENST00000303979 915 ntBASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 AC130371.2-201ENST00000619443 611 ntBASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 RCC2P6-201ENST00000526625 1557 ntBASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF4Q9BUZ4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms