Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 AL031432.2-201ENST00000566714 459 ntBASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 AL928711.1-201ENST00000570165 459 ntBASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 NKAPP1-205ENST00000585790 367 ntBASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRFN3Q9BTN0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
LRFN3Q9BTN0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
LRFN3Q9BTN0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
LRFN3Q9BTN0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.52■□□□□ 0.55
LRFN3Q9BTN0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 TERF1P3-201ENST00000505638 1227 ntBASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 AC084346.2-201ENST00000607097 949 ntBASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 AC005593.1-201ENST00000624894 515 ntBASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 AP000867.4-201ENST00000641616 219 ntBASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 AC079834.2-201ENST00000609776 1949 ntBASIC18.51■□□□□ 0.55
LRFN3Q9BTN0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 AP000344.2-201ENST00000512987 629 ntBASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 AC025678.2-201ENST00000562061 970 ntBASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN3Q9BTN0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 PGM5P2-202ENST00000637225 1043 ntBASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 AL109659.2-201ENST00000606809 1674 ntBASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 AL024507.2-201ENST00000606070 2574 ntBASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN3Q9BTN0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 AC236430.1-201ENST00000402231 743 ntBASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms