Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXC2Q99958 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
FOXC2Q99958 AC018712.1-201ENST00000455767 687 ntBASIC15.65■□□□□ 0.1
FOXC2Q99958 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXC2Q99958 AC073648.2-201ENST00000510116 352 ntBASIC15.65■□□□□ 0.1
FOXC2Q99958 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXC2Q99958 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXC2Q99958 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 AC011840.4-201ENST00000578471 627 ntBASIC15.65■□□□□ 0.1
FOXC2Q99958 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXC2Q99958 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.65■□□□□ 0.1
FOXC2Q99958 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.65■□□□□ 0.1
FOXC2Q99958 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.65■□□□□ 0.1
FOXC2Q99958 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXC2Q99958 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXC2Q99958 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
FOXC2Q99958 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
FOXC2Q99958 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
FOXC2Q99958 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 RPS2P28-201ENST00000314255 741 ntBASIC15.64■□□□□ 0.09
FOXC2Q99958 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
FOXC2Q99958 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
FOXC2Q99958 MIR564-202ENST00000385049 94 ntBASIC15.64■□□□□ 0.09
FOXC2Q99958 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
FOXC2Q99958 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
FOXC2Q99958 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.64■□□□□ 0.09
FOXC2Q99958 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.64■□□□□ 0.09
FOXC2Q99958 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXC2Q99958 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 AP005901.3-202ENST00000581653 237 ntBASIC15.64■□□□□ 0.09
FOXC2Q99958 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.64■□□□□ 0.09
FOXC2Q99958 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXC2Q99958 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.64■□□□□ 0.09
FOXC2Q99958 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXC2Q99958 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXC2Q99958 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
FOXC2Q99958 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
FOXC2Q99958 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.63■□□□□ 0.09
FOXC2Q99958 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXC2Q99958 AC098831.1-202ENST00000438821 336 ntBASIC15.63■□□□□ 0.09
FOXC2Q99958 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXC2Q99958 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXC2Q99958 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXC2Q99958 MIR5100-201ENST00000579544 119 ntBASIC15.63■□□□□ 0.09
FOXC2Q99958 MIR3180-4-201ENST00000582223 153 ntBASIC15.63■□□□□ 0.09
FOXC2Q99958 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXC2Q99958 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXC2Q99958 AC008608.2-201ENST00000606089 416 ntBASIC15.63■□□□□ 0.09
FOXC2Q99958 AC083906.6-201ENST00000641366 219 ntBASIC15.63■□□□□ 0.09
FOXC2Q99958 AC079781.4-201ENST00000641908 219 ntBASIC15.63■□□□□ 0.09
FOXC2Q99958 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXC2Q99958 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.63■□□□□ 0.09
FOXC2Q99958 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXC2Q99958 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
FOXC2Q99958 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
FOXC2Q99958 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXC2Q99958 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
FOXC2Q99958 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.62■□□□□ 0.09
FOXC2Q99958 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXC2Q99958 UPF3AP3-201ENST00000420996 769 ntBASIC15.62■□□□□ 0.09
FOXC2Q99958 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms