Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SMOQ99835 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMOQ99835 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMOQ99835 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.5■□□□□ 0.71
SMOQ99835 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.5■□□□□ 0.71
SMOQ99835 ZNF444P1-201ENST00000559497 298 ntBASIC19.5■□□□□ 0.71
SMOQ99835 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.5■□□□□ 0.71
SMOQ99835 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.5■□□□□ 0.71
SMOQ99835 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.5■□□□□ 0.71
SMOQ99835 AL391807.1-203ENST00000604392 2365 ntBASIC19.5■□□□□ 0.71
SMOQ99835 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 AL163051.1-201ENST00000569214 1512 ntBASIC19.5■□□□□ 0.71
SMOQ99835 AC112777.1-201ENST00000540175 1423 ntBASIC19.5■□□□□ 0.71
SMOQ99835 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMOQ99835 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.49■□□□□ 0.71
SMOQ99835 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMOQ99835 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMOQ99835 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMOQ99835 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMOQ99835 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.49■□□□□ 0.71
SMOQ99835 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
SMOQ99835 HLA-F-220ENST00000434407 884 ntBASIC19.49■□□□□ 0.71
SMOQ99835 VENTXP5-201ENST00000523979 775 ntBASIC19.49■□□□□ 0.71
SMOQ99835 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SMOQ99835 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.49■□□□□ 0.71
SMOQ99835 AL358472.4-201ENST00000633140 710 ntBASIC19.49■□□□□ 0.71
SMOQ99835 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMOQ99835 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.49■□□□□ 0.71
SMOQ99835 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMOQ99835 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.49■□□□□ 0.71
SMOQ99835 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMOQ99835 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMOQ99835 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SMOQ99835 MYLKP1-201ENST00000509077 1580 ntBASIC19.49■□□□□ 0.71
SMOQ99835 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.48■□□□□ 0.71
SMOQ99835 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.48■□□□□ 0.71
SMOQ99835 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.48■□□□□ 0.71
SMOQ99835 AC099343.3-201ENST00000605834 2503 ntBASIC19.48■□□□□ 0.71
SMOQ99835 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.48■□□□□ 0.71
SMOQ99835 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.48■□□□□ 0.71
SMOQ99835 AL136038.3-201ENST00000561909 1096 ntBASIC19.48■□□□□ 0.71
SMOQ99835 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.48■□□□□ 0.71
SMOQ99835 AL136038.4-201ENST00000603606 1261 ntBASIC19.48■□□□□ 0.71
SMOQ99835 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.48■□□□□ 0.71
SMOQ99835 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 AC087289.5-201ENST00000586076 3175 ntBASIC19.48■□□□□ 0.71
SMOQ99835 AC005332.1-201ENST00000577698 1310 ntBASIC19.48■□□□□ 0.71
SMOQ99835 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMOQ99835 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.47■□□□□ 0.71
SMOQ99835 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.47■□□□□ 0.71
SMOQ99835 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.47■□□□□ 0.71
SMOQ99835 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.47■□□□□ 0.71
SMOQ99835 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SMOQ99835 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SMOQ99835 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
SMOQ99835 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMOQ99835 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.47■□□□□ 0.71
SMOQ99835 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.47■□□□□ 0.71
SMOQ99835 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms