Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
SCAF11Q99590 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC26.69■■□□□ 1.86
SCAF11Q99590 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC26.69■■□□□ 1.86
SCAF11Q99590 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCAF11Q99590 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SCAF11Q99590 PCDHAC2-203ENST00000615316 3011 ntBASIC26.69■■□□□ 1.86
SCAF11Q99590 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
SCAF11Q99590 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SCAF11Q99590 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
SCAF11Q99590 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCAF11Q99590 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC26.69■■□□□ 1.86
SCAF11Q99590 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCAF11Q99590 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCAF11Q99590 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCAF11Q99590 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCAF11Q99590 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCAF11Q99590 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC26.68■■□□□ 1.86
SCAF11Q99590 LITAF-211ENST00000572255 516 ntTSL 4 BASIC26.68■■□□□ 1.86
SCAF11Q99590 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
SCAF11Q99590 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC26.68■■□□□ 1.86
SCAF11Q99590 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC26.68■■□□□ 1.86
SCAF11Q99590 AC008608.2-201ENST00000606089 416 ntBASIC26.68■■□□□ 1.86
SCAF11Q99590 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCAF11Q99590 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SCAF11Q99590 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCAF11Q99590 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC26.68■■□□□ 1.86
SCAF11Q99590 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC26.68■■□□□ 1.86
SCAF11Q99590 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC26.68■■□□□ 1.86
SCAF11Q99590 PPOX-214ENST00000535223 664 ntTSL 3 BASIC26.68■■□□□ 1.86
SCAF11Q99590 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC26.68■■□□□ 1.86
SCAF11Q99590 AC139887.3-201ENST00000568585 713 ntBASIC26.68■■□□□ 1.86
SCAF11Q99590 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC26.68■■□□□ 1.86
SCAF11Q99590 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCAF11Q99590 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
SCAF11Q99590 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF11Q99590 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF11Q99590 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF11Q99590 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF11Q99590 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
SCAF11Q99590 AC008556.1-201ENST00000610908 2040 ntBASIC26.67■■□□□ 1.86
SCAF11Q99590 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF11Q99590 ADM-207ENST00000530439 1839 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF11Q99590 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF11Q99590 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF11Q99590 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF11Q99590 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF11Q99590 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF11Q99590 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC26.67■■□□□ 1.86
SCAF11Q99590 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF11Q99590 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF11Q99590 PGAM5P1-201ENST00000518923 814 ntBASIC26.67■■□□□ 1.86
SCAF11Q99590 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC26.67■■□□□ 1.86
SCAF11Q99590 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF11Q99590 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF11Q99590 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF11Q99590 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF11Q99590 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF11Q99590 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF11Q99590 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF11Q99590 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF11Q99590 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF11Q99590 MINOS1P3-201ENST00000457048 203 ntBASIC26.66■■□□□ 1.86
SCAF11Q99590 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF11Q99590 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC26.66■■□□□ 1.86
SCAF11Q99590 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC26.66■■□□□ 1.86
SCAF11Q99590 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC26.65■■□□□ 1.86
SCAF11Q99590 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF11Q99590 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC26.65■■□□□ 1.86
SCAF11Q99590 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF11Q99590 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SCAF11Q99590 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF11Q99590 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF11Q99590 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF11Q99590 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF11Q99590 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF11Q99590 AC093909.1-201ENST00000504731 1122 ntBASIC26.65■■□□□ 1.86
SCAF11Q99590 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC26.65■■□□□ 1.86
SCAF11Q99590 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC26.65■■□□□ 1.86
SCAF11Q99590 MIR3180-4-201ENST00000582223 153 ntBASIC26.65■■□□□ 1.86
SCAF11Q99590 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF11Q99590 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
SCAF11Q99590 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC26.65■■□□□ 1.86
SCAF11Q99590 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SCAF11Q99590 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.86
SCAF11Q99590 AC005104.2-201ENST00000427818 678 ntBASIC26.64■■□□□ 1.86
SCAF11Q99590 IRF8-202ENST00000562492 946 ntTSL 3 BASIC26.64■■□□□ 1.86
SCAF11Q99590 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SCAF11Q99590 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC26.64■■□□□ 1.86
SCAF11Q99590 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC26.64■■□□□ 1.86
SCAF11Q99590 AC114341.1-201ENST00000618070 349 ntBASIC26.64■■□□□ 1.86
SCAF11Q99590 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
SCAF11Q99590 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
SCAF11Q99590 AC073130.3-201ENST00000624389 2278 ntBASIC26.64■■□□□ 1.86
SCAF11Q99590 AC141586.3-201ENST00000562166 1838 ntBASIC26.64■■□□□ 1.85
SCAF11Q99590 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SCAF11Q99590 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
SCAF11Q99590 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SCAF11Q99590 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC26.64■■□□□ 1.85
SCAF11Q99590 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC26.64■■□□□ 1.85
SCAF11Q99590 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms