Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK5RAP2Q96SN8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 AP005901.3-202ENST00000581653 237 ntBASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.88■■□□□ 1.09
CDK5RAP2Q96SN8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 AC011498.5-201ENST00000592027 486 ntBASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP2Q96SN8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 AC099343.3-201ENST00000605834 2503 ntBASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 TSPY12P-201ENST00000421279 868 ntBASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 LINC00265-3P-201ENST00000447588 903 ntBASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 RN7SL510P-201ENST00000581311 263 ntBASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.86■■□□□ 1.09
CDK5RAP2Q96SN8 KRT18P1-202ENST00000452408 1331 ntBASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 AC005082.1-201ENST00000413042 2259 ntBASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 AC104819.1-201ENST00000504587 486 ntBASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 AL163051.1-201ENST00000569214 1512 ntBASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP2Q96SN8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 AC138894.3-201ENST00000603787 634 ntBASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP2Q96SN8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms