Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.1■□□□□ 0.01
RAB40CQ96S21 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 AC105036.2-201ENST00000569468 176 ntBASIC15.1■□□□□ 0.01
RAB40CQ96S21 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RAB40CQ96S21 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 AC093677.2-201ENST00000600169 1863 ntBASIC15.1■□□□□ 0.01
RAB40CQ96S21 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40CQ96S21 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40CQ96S21 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.09■□□□□ 0.01
RAB40CQ96S21 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RAB40CQ96S21 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 MTMR9LP-203ENST00000426597 1545 ntBASIC15.09■□□□□ 0.01
RAB40CQ96S21 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 AL050303.2-201ENST00000619798 666 ntBASIC15.09■□□□□ 0.01
RAB40CQ96S21 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RAB40CQ96S21 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.09■□□□□ 0.01
RAB40CQ96S21 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.09■□□□□ 0.01
RAB40CQ96S21 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 AL499627.1-201ENST00000569373 2188 ntBASIC15.09■□□□□ 0.01
RAB40CQ96S21 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RAB40CQ96S21 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40CQ96S21 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.09■□□□□ 0.01
RAB40CQ96S21 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RAB40CQ96S21 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
RAB40CQ96S21 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
RAB40CQ96S21 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40CQ96S21 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
RAB40CQ96S21 AC139713.2-201ENST00000641328 2723 ntBASIC15.08■□□□□ 0.01
RAB40CQ96S21 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.08■□□□□ 0.01
RAB40CQ96S21 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 338.7 ms