Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.55■□□□□ 0.4
NR1H4Q96RI1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 KRT87P-202ENST00000534226 1464 ntBASIC17.54■□□□□ 0.4
NR1H4Q96RI1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
NR1H4Q96RI1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 HLA-G-202ENST00000376815 851 ntBASIC17.53■□□□□ 0.4
NR1H4Q96RI1 HLA-G-203ENST00000376818 1127 ntBASIC17.53■□□□□ 0.4
NR1H4Q96RI1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 AC243732.1-201ENST00000612648 864 ntBASIC17.53■□□□□ 0.4
NR1H4Q96RI1 FER1L4-210ENST00000615531 5998 ntBASIC17.53■□□□□ 0.4
NR1H4Q96RI1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 AL596257.1-201ENST00000641463 2694 ntBASIC17.53■□□□□ 0.4
NR1H4Q96RI1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H4Q96RI1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 LINC01126-201ENST00000623515 1646 ntBASIC17.52■□□□□ 0.4
NR1H4Q96RI1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 YBX1P1-201ENST00000445822 960 ntBASIC17.52■□□□□ 0.4
NR1H4Q96RI1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NR1H4Q96RI1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.52■□□□□ 0.39
NR1H4Q96RI1 LINC00602-201ENST00000629776 2065 ntBASIC17.52■□□□□ 0.39
NR1H4Q96RI1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NR1H4Q96RI1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NR1H4Q96RI1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NR1H4Q96RI1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms