Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CSPG4P5Q96PW8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.19■□□□□ 0.66
CSPG4P5Q96PW8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 ECEL1P2-202ENST00000465689 757 ntBASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG4P5Q96PW8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 AP000593.1-201ENST00000393668 712 ntBASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 AC087499.1-201ENST00000418141 1075 ntBASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 LINC01568-207ENST00000641790 1380 ntBASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG4P5Q96PW8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 BICD1-207ENST00000551848 1962 ntBASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 HOXB1-202ENST00000577092 1414 ntBASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG4P5Q96PW8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 AC135050.7-201ENST00000624508 2218 ntBASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms