Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 AC111152.3-201ENST00000569699 673 ntBASIC18.65■□□□□ 0.58
SIPA1Q96FS4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SIPA1Q96FS4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SIPA1Q96FS4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.64■□□□□ 0.58
SIPA1Q96FS4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 NUS1P1-201ENST00000446295 882 ntBASIC18.64■□□□□ 0.57
SIPA1Q96FS4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 AC005332.3-201ENST00000589904 676 ntBASIC18.64■□□□□ 0.57
SIPA1Q96FS4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 AC068587.9-201ENST00000641814 219 ntBASIC18.64■□□□□ 0.57
SIPA1Q96FS4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.64■□□□□ 0.57
SIPA1Q96FS4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
SIPA1Q96FS4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 DRAXINP1-201ENST00000437611 948 ntBASIC18.63■□□□□ 0.57
SIPA1Q96FS4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 LINC00265-3P-201ENST00000447588 903 ntBASIC18.63■□□□□ 0.57
SIPA1Q96FS4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 AP000867.3-201ENST00000524675 377 ntBASIC18.63■□□□□ 0.57
SIPA1Q96FS4 TPSP2-201ENST00000561760 610 ntBASIC18.63■□□□□ 0.57
SIPA1Q96FS4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 RN7SL510P-201ENST00000581311 263 ntBASIC18.63■□□□□ 0.57
SIPA1Q96FS4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIPA1Q96FS4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 AC009065.1-201ENST00000564055 1225 ntBASIC18.62■□□□□ 0.57
SIPA1Q96FS4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms