Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 FAM210CP-201ENST00000445714 574 ntBASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 LIN28AP1-201ENST00000429574 405 ntBASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 AL137013.1-201ENST00000432946 1228 ntBASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CTHRC1Q96CG8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 AC005521.1-201ENST00000393351 872 ntBASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.23■□□□□ 0.35
CTHRC1Q96CG8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 RCN1P1-201ENST00000400413 996 ntBASIC17.22■□□□□ 0.35
CTHRC1Q96CG8 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms